Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371482
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Entry
139371482 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-2-like isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139371482
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139371482
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139371482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
Torus
zf-CCCH_2
RVT_1
zf-CCCH_3
MKRN1_C
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-CCCH_9
zf-rbx1
APOBEC1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
139371482
NCBI-ProteinID:
XP_070968035
LinkDB
All DBs
Position
17:85306224..85370175
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AA seq
524 aa
AA seq
DB search
MLTLNTGAPQGCVPSHFLYSLFTHDCLATQDSNTIIKFANDTTVVGLITDGNDSAYREEV
RDLAVWFQDNNLSLNISKTKELIVDHRRNRGEHAPYTLTRLLWSRYFLHGVCREGNRCMF
SHDLTTSKPSTICKFYQRGVCAYGDRCRYDHIKPSGGGGGGGGRGVSMDLPNRNPITAGA
FIPPGVPGPLAPTAPQARHQGGKKPLVLRDRVLGCDSTMMPFGGGGSEADCWTEYHDNSA
HAKPPHSYLDAIRTGLECSATAGPYHVAGPQPQLCPYAAAGQCNYGNTCPYLHGDMCDIC
RLQVLHPHNPEQRRAHEKMCMLVFEADMEKAFAAQHSQDKVCSICMEVVYEKAAASERRF
GILSSCCHTYCLSCIRQWRCAKQFENKSCPECRVVSEFVIPSGFWVEDQDEKNRLIEDFK
SGVSKKACKYFDQGRGTCPFGGKCFYMHAYPDGTRAEPDKPRKQLGSEGNVRFLNSVRLW
DFIEEREQRSVAQPQEDEVSELRELFMQMSGPGGEESSAVSAQP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccctcaacacgggggcccctcaggggtgtgtgcctagtcacttcctgtactcc
ctgttcacccatgactgtctggccactcaggactccaacaccatcattaagtttgctaac
gacacgacggtggtaggcctgatcaccgacggcaatgattcagcctacagggaggaggtc
agagacttagcagtgtggttccaggacaacaacctctccctcaacatcagtaagaccaag
gagctgattgtggaccataggagaaataggggagagcacgccccatacacattgacaagg
ctgttgtggagcaggtattttctccatggagtctgccgagaggggaataggtgcatgttc
tctcatgacctgaccaccagtaaaccttcaaccatttgtaagttctaccagagaggtgtg
tgtgcctacggagaccgctgcaggtatgaccacatcaagccatctggtggtggtggtgga
ggaggagggagaggtgtgtccatggacctccctaacagaaaccccatcactgctggggcc
ttcatcccccctggggtgcctggacctctcgcccccactgcaccccaagccaggcatcag
ggggggaagaaaccgctggtgctgagagatcgagtcctggggtgtgacagtacaatgatg
cccttcggtgggggtggctcagaggcggactgttggacggagtaccatgacaacagtgcc
catgccaaacctccacactcctacctagatgccatcaggaccggtctggagtgttctgcc
acggccggcccctaccatgtcgctggcccccagccacagctctgtccctacgccgctgca
ggacagtgtaactacggaaacacctgtccctatctccacggtgatatgtgtgacatctgc
cgtctgcaggtgctccacccacacaaccctgagcagaggagagctcacgagaagatgtgt
atgttggtgtttgaggcggacatggagaaggcgtttgcagcgcagcacagccaggacaag
gtgtgttctatctgtatggaggtggtttatgagaaagctgctgcctcagagagacgcttc
gggatcctctcttcctgctgccacacatactgcctctcctgcatccgccagtggcgctgc
gccaagcagtttgagaacaagtcatgtccagagtgcagagtggtgtctgagtttgtcatc
cccagtggtttctgggtggaggaccaggatgagaagaacagactgatagaggacttcaag
tctggagtcagtaagaaggcgtgtaagtactttgaccagggccggggaacctgtccgttt
ggagggaagtgtttctacatgcatgcttaccctgacggaacacgggccgagccggacaaa
ccccgcaagcagctgggctctgaggggaacgtgaggttcctgaactctgtccgtctgtgg
gacttcatcgaggagcgcgagcagcgcagtgttgcccagccgcaggaagatgaggtcagc
gaactgagagaactcttcatgcagatgtctggtccaggaggggaggagagcagtgcagtg
tctgcccagccctga
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