KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372027
Entry
139372027         CDS       T10872                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K10373  tropomyosin 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04260  Cardiac muscle contraction
ocla04261  Adrenergic signaling in cardiomyocytes
ocla04814  Motor proteins
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    139372027
   04820 Cytoskeleton in muscle cells
    139372027
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    139372027
   04261 Adrenergic signaling in cardiomyocytes
    139372027
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139372027
   04147 Exosome [BR:ocla04147]
    139372027
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     139372027
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   139372027
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ DUF745 ATG16 Crescentin PUMA_CC TMF_DNA_bd Lebercilin CENP-F_leu_zip EzrA DUF3450 DUF16 KH_DEAH11_2nd Laminin_I FPP SlyX Fez1 FH2 TMP_N
Other DBs
NCBI-GeneID: 139372027
NCBI-ProteinID: XP_070968079
LinkDB
Position
2:65968174..65981955
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLEVAEKTATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQDIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDNALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagctcgag
gatgacttggtagctctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tccgagtctcttaaggatgcccaggagaaacttgaggtggctgagaagacagccactgac
gctgaggccgatgtcgcttcccttaacagacgtatccagctagttgaggaggagttggat
cgtgctcaggagcgtctggcaactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtccgagagaggcatgaaggtcattgagaacagggcctccaaggatgaggagaag
atggagctgcaggatatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggaacgtacagaa
gagcgcgccgagctttcagaaggcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggtcctcactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtagccaaacttgagaagaccatcgacgacttggaagatgagttg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggacaacgccctcaacgac
atgacttccatataa

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