Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372240
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Entry
139372240 CDS
T10872
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139372240
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139372240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139372240
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139372240
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Claudin_2
Motif
Other DBs
NCBI-GeneID:
139372240
NCBI-ProteinID:
XP_070968103
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Position
18:complement(4666773..4685446)
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AA seq
460 aa
AA seq
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MFYLKVHPLLVGILVVLAGSARCSEDETRLVKTLFTGYNKVVRPVNHFRDPVVVTVGLQL
IQLISVDEVNQIVTSNVRLKQIWEDVNLKWNPDDYSGIKKIRIPSTDIWRPDLVLYNNAD
GDFAIVHQTKVLLEHTGLITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVV
VNPDNDRPDLSNFMESGEWVMQDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIVITVIVINTHHRSPSTHTMPQWVRKIFIDTIPNFMFFSTMKRPSRDRQ
EKRIHPADFDISDISGKPAPASVTFQSPITKNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTMGVFAGRLIELSMQG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttgaaggtacaccctcttcttgttgggattctggttgttttagcaggttca
gccaggtgttcagaagatgagacacgtctggttaaaaccctgttcaccggctataacaag
gtggtccgccctgtcaatcacttcagagatccggtggtggtgaccgtaggcttgcagctc
atccagctcattagtgtggatgaagtcaatcaaattgtgaccagtaatgtgcgtctgaaa
cagatatgggaggacgtgaatctgaagtggaaccctgatgattatagtggaattaagaag
atcagaatcccttctacagacatctggcgtcctgacctcgtgctctacaacaatgcagat
ggagactttgcaatcgtccatcagaccaaggtgctgctggagcacacaggtctgatcacc
tggaaccctccggccatttttaagagctactgtgagatcattgtgcttcacttccccttc
gacctgcagaactgcagtatgaagctggggacatggacctacgacggcaacctggtagtg
gtcaacccggacaacgaccggcctgacctgagtaacttcatggagagtggtgagtgggtg
atgcaggactataggagctggaagcactgggtgtactatgcctgctgccctgacacaccc
tacctggatatcacctaccacttcctgatgctgaggctgcctctctacttcatcgtcaac
gtcatcatcccctgcatgctgttctccttcctgactggactggtcttctacctccccact
gactctggtgagaagatgaccctgtctatctctgtcctgctgtctctgactgtgtttctg
ctggttatcgtggagctcatcccctccacctccagtgcggtgcctctcattgggaagtac
atgctcttcaccatggtcttcgtcatagcctccatcgtcatcaccgtcatcgtcatcaac
acacaccaccgctctcccagtacacacacaatgccccagtgggtccgcaagattttcatc
gacaccatccccaatttcatgttcttctcgactatgaagcgtccatccagggacaggcag
gagaagaggatccacccggctgactttgacatctccgacatctcgggcaagcctgcccct
gcctctgtcaccttccagtcccccatcaccaagaacccggacgtccgcagcgccatcgag
ggggtcaagtacatcgcagagaccatgaagtctgatgaagagtccaacaatgctgctgag
gagtggaagtttgtagccatggtcctggatcacatcttgctgtgtgtgttcatggctgtg
tgtatcatcggcaccatgggagtgttcgctggacgcctcattgagctgagcatgcagggc
taa
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