Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372246
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Entry
139372246 CDS
T10872
Name
(RefSeq) gastrin-releasing peptide receptor-like
KO
K04169
gastrin-releasing peptide receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139372246
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139372246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139372246
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Bombesin
139372246
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
139372246
NCBI-ProteinID:
XP_070968113
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Position
18:complement(4979561..4989638)
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AA seq
388 aa
AA seq
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MSFEEPFHITQEFDLYQNVSKWAHHGNHTVATSVQSMFYISIAITAIYGVIIVVGLIGNI
TLIKTLSSSKSMRNVPNLFMSSLAFGDLVLLVTCAPVDASRYLADEWLFGRVGCKLIPFI
QLTSVGVSVFTLTALSADRYKAIVKPMDIQASNAPARIVLRAAVIWLFSMTLAVPEAVFS
DLRSFSIHSTNETFITCAPYPHDGELHPKIHSMASFLIFYVIPLSVISVYYLFIARSLIR
SAYNMPVEGNVHVRRQIESRKRLAKTVLVFVGLFAVCWLPCHVIYLNRSYHYSEVDTSMA
HFIFTVGARILAFTNSCVNPFALYLLSKSFQKQFNKQLCCCCRALAKRSQSQRRNRNNTN
MTSLRTTNHSVASLSFINGKHICQEDSV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgaagaaccttttcatattacacaagaatttgatttgtaccagaatgtgtcc
aaatgggcgcaccacggtaatcacacagtggccacttcggtacaatctatgttctacatc
agcatcgccatcactgccatttatggagtcatcatagtcgtgggactaatcggtaacata
accctcatcaagacattgtcttcctctaaatccatgcggaatgtccccaacctcttcatg
tcgagtctcgcgttcggggacttggtcctcctggttacttgcgcgccggtggatgccagt
cggtacctcgcggacgagtggctcttcggtagagttggatgtaaactcataccattcatc
caactcacctccgtcggagtgtctgtttttaccctgactgcgttgtctgctgataggtac
aaggcaatcgtgaagcccatggacatccaggcctccaacgccccggcgaggatcgtcctg
cgggctgcagtaatctggctcttctccatgaccctggctgtccccgaggctgtcttctca
gacctccgctcgttcagcatccacagcaccaatgagaccttcatcacctgcgccccctat
ccccacgatggtgaactgcaccccaagatccactccatggcctccttcctcatcttctat
gtcattcctctgtcggttatatcagtctattacctgttcatcgccaggagcctgatcagg
agtgcctataatatgccggtggagggcaacgtgcacgtcagaagacagatagagtccagg
aagcgccttgccaagaccgtcctggtgtttgtgggcctgttcgccgtgtgctggctcccc
tgtcacgtgatctacctcaaccgctcctaccactactccgaagtggacacctccatggcc
cacttcatcttcaccgtgggagcccgtatcctggccttcactaactcctgtgtcaacccc
ttcgccctctacctgctcagcaagagtttccagaagcagttcaacaagcagctgtgttgt
tgttgtcgagccctggcgaagaggtcccagagccagaggaggaacaggaacaacacaaac
atgacctccctcaggaccaccaaccactcagtggccagtctgagctttattaatggaaaa
cacatctgtcaggaggacagtgtgtga
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