Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372370
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Entry
139372370 CDS
T10872
Name
(RefSeq) uncharacterized protein
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139372370
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Others
139372370
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
139372370
NCBI-ProteinID:
XP_070968183
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Position
18:52235918..52271980
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AA seq
677 aa
AA seq
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MARWESRSWSWSLMMSLLLSLSAHGDLSLTTVSRTEVQHSQSSFSAVERAVLIGDDSAEL
IGLGLGLAAGLPLSAIKRKPSHRRHSHLDFTEQDDQTIREELTGGESQERSDDIIKVEFH
NPDRPLTPDLSSDSDWLTAVVQPLQQRAGDPTAWTLSDFYDYLSPDDELSTIDTTLDPDP
TLTPLADMEDENPSLTGSPVPNVTPDNDDPQPPSQSQPPSQSQSPPPPFPPQGSDGCGLG
FVRSEVGGECVSQCDAQPDFCYNRGVCTIATGIGAFCRCNVQDYMWNKGSRCDWVVTDFQ
VLCVVVGVASTTLILLIIIIVFFAKRLHRLRIENRRLRKRSIYRPHSEMQTDDFSVSTAQ
DGSHANVRKLCDSPPPPPQPHAHNLAYYDNIICQDDPQKMEDPVKSQFTQGEESLNIANS
HSPKHINNRPAHSSDHTPNADQEQDGVTIGLQLLLPKEAKLRPEASPPLHYNFFLYKKGT
GPSTTTSNPTTTNYTNHSMATAWNHSEPNILPNSNSNKTSWNYSNNSNPNMNFNPIKDSQ
VSQNHVTPHHQSHTSPHRHSYPHYSSLRFTSPQRMPVSPHHASHHYQSSPSSPHHSAFHY
PSTHHHSAASPSSSHHLPYQPSSPPLPTPRGHSRAPHSDKPHPQVTLHPSPSSPILHYPS
PPSSPHLSHPISTYSLS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctgggagagccggtcgtggagttggtcattaatgatgtctctcctcctctct
ctgtctgctcacggagacctctcattgaccaccgtcagcaggacggaagtccagcacagc
caatcatctttctccgctgtagaaagggcggtgcttatcggtgatgactcagcagagctg
attggtttagggttaggactagcggctggacttcctctcagcgccatcaaacgcaaaccc
tctcacagaagacactcccacttggacttcactgaacaggacgatcagacaatcagagaa
gagctaactggcggggaatctcaggaacgctcagatgatatcatcaaggtggagttccat
aaccccgaccgccccttgacccctgacctctcgtctgattctgattggctgacggctgta
gttcagcccctgcagcagcgggcgggagaccccacagcctggactctgtcagatttctac
gactacttgtcccccgatgacgaactctccaccatagacacaacccttgaccctgatccg
accctgacccctctggcagacatggaggatgaaaacccatcgctcactggctcccctgtc
cccaatgttacccctgacaatgatgacccccagccaccctctcagtctcagcccccctct
cagtctcaatccccccctcctcctttccctcctcaggggtcagatgggtgtggtctgggc
tttgtgaggtcagaggtcgggggtgagtgtgtgtctcagtgtgacgcacagcctgacttc
tgctacaacagaggagtttgtaccattgctactggaataggagcattctgcagatgtaat
gttcaggactatatgtggaacaagggatctcgttgtgattgggtggtgacagacttccag
gtgctgtgtgtggtagtgggtgtggcctctacgaccctcatcctactcatcatcatcatc
gtcttcttcgccaaacgactccaccgcctgaggattgagaacaggcgactccgcaaacgc
agtatataccgtccacacagcgagatgcagactgatgacttctctgtttccacggcgcaa
gatggttcccatgccaacgtaaggaagttgtgtgactcccccccgcccccccctcaaccc
cacgctcacaatctggcttactatgacaacattatctgtcaggacgaccctcagaaaatg
gaggaccctgtaaagtctcaattcactcaaggggaggagtctctgaacatcgccaactct
cattcgcccaaacatattaacaaccgccctgcccactcctctgaccacacccctaacgca
gaccaggagcaggatggagtcaccattggtctacagttgctcctccctaaagaggctaag
ctccgccccgaggccagcccccctctgcactacaacttcttcctctacaagaaggggact
ggtccctctactactaccagtaatcctaccaccactaactacaccaaccacagcatggct
actgcttggaaccactctgagcctaacatactgcccaatagtaactccaataagacttcc
tggaactatagcaataactctaaccctaacatgaactttaaccccattaaagactcacag
gtctctcagaatcacgttactcctcatcatcaatctcacacctcccctcatcgccactcc
tacccccattacagctccctccgttttacctctcctcagagaatgcctgtctcccctcat
catgcttcacaccattaccagtcctccccctcctcaccccatcatagcgccttccattat
ccttccacccaccaccatagtgctgcctccccttcctcctcccatcacctgccctaccag
ccctcttcccccccgcttcctacacccaggggtcactccagagccccccactcagacaaa
cctcacccccaagtcactctacatccctccccctcctcacccatcctccactatccctcc
ccaccatcctccccccacctctcccaccctatcagcacctactcactgtcttaa
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