Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372423
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Entry
139372423 CDS
T10872
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139372423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139372423
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139372423
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139372423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
DUF948
MRP-S31
BLOC1_2
ALMT
zf-RING_6
DUF4363
CCDC22_CC
5_nucleotid
IBR_1
Motif
Other DBs
NCBI-GeneID:
139372423
NCBI-ProteinID:
XP_070968236
LinkDB
All DBs
Position
18:complement(7013033..7025315)
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AA seq
845 aa
AA seq
DB search
MSGNLWTEEQFNCPVCLDLPNEPVTIPCGHSYCMGCIKDYWSKDNPRSPGVYSCPQCRQT
FCPKPSLSRNTMLAEAVEQLRKGALTTSARESIRSAHRANTMGRAKGSSRSGGVSRLPAM
AVPCDMCHGAGDQRAAVKSCLVCMASYCEAHLKPHQTKAELKKHELIAPTGKLAQKICTE
HKYLQEFYCRQCQIFVCWLCTSNQHKDHETTSTKAERTERQKELAEVQTENHQRLKEREG
ELKDMKKMLEATKRSADRVHDDTETVLSELQRSVERLQELVEGVMNQAGQEKVSEAQDVV
DKLEAEISELKRRDKDMKEVFRCEDNIHFLETCESLCSPFECNDLSCVVANPEATFEPVR
EAILNLRERVEDMCNVELGKITKTVNDTTLFTLGDKAKKNGVQKTGGFRSLFSGLGSKTT
TTNNNRPAAPTPTVSVAVRGPNSRADRDRPRREEREPAREAAPRPSTRSSPTQRRKKPAR
NSPTQSRRETRRRSPSPTPSRREPASPSPTPSRREPASPSPTPSRREPARPSPTSSRRET
PRPEPTTTPTPGAVTQATPASGAFSRMGSIASLFRSHRRATPAPGPVNNNTGGVDPWGMG
ALTESQPEVNTSLFLDPPTPDPIMNQMPAFPALREIDISSIQAPEPRSREEFLQYACTLT
LDTRTAHRRLTLSESNTKATLQGAGQPYPDCPQRFDGWTQVLCQAPLSAQRCYWEVDWRG
KGSSMGVAYGALSRKGADARAGLGYNAQSWSLELSDTCCTAMHDNEKRDIPVTYSPRLGL
FLDLNAGTLAFYSVAESMGHLHTFRANFTQPLYAAFGVGSGVGVGLDFALGQFSQTSDSI
KICPM
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaatctgtggacggaggagcagttcaactgtcctgtgtgcctggacctcccc
aatgagccagtcaccatcccgtgtggccacagctactgcatgggctgcatcaaggactac
tggagcaaggacaaccctcgctcccctggagtctacagctgcccccagtgccgccagaca
ttctgtcccaagccctccttgtccaggaacaccatgctggcagaggccgtggagcagctc
cgcaagggggccctcaccacctccgccagggagtccatccggagcgcccaccgtgccaac
accatgggtagagccaagggaagttcccgtagtggtggtgtcagcaggctgccagccatg
gccgtgccctgtgacatgtgccacggcgctggagatcagcgggctgcggtgaagtcttgc
ctggtgtgtatggcgtcctactgcgaggcccacctgaaaccgcatcagacgaaagcggag
ttgaaaaagcatgagctgattgcgcccacgggcaagctggcgcagaagatctgtaccgag
cacaagtacctgcaggagttctactgtcgccagtgccagatttttgtgtgctggctgtgc
accagtaaccagcacaaggaccatgagaccacctccaccaaggcagagcgcacggagaga
cagaaagagctggctgaggtgcagacagagaatcatcagagactgaaagaaagagaagga
gagctgaaagacatgaagaagatgctggaggcaacaaagcgctcagcagacagggtacat
gatgacacagagacggtgctgtcggagctccagcgctcagtggagaggctccaggagctg
gtggagggtgtgatgaaccaggctgggcaggagaaagtaagcgaggcccaggacgtggtg
gacaagctggaggccgagatctcggagctgaagaggagagacaaggacatgaaggaggtg
ttccgctgtgaggacaacatccacttcctggagacctgtgagtctctgtgcagcccgttt
gagtgtaatgatctgtcgtgtgtggtggccaatccagaggctacgtttgagcctgtacgt
gaagccatcctgaacctacgggagagagtggaggacatgtgcaacgtggaactgggcaag
atcaccaagacagtgaatgacacaacactgttcaccttaggagacaaagcaaaaaaaaat
ggcgtccagaagacgggagggttcaggagtttgttttctggtctgggatccaaaacaaca
acaacaaacaacaaccgtcctgcagctcccacaccgactgtctccgtggcggttcgagga
cctaactcacgtgctgacagagacaggccgaggagagaggagagagaaccagccagagag
gcagcccccaggccaagcaccagatctagtcccactcagaggcggaaaaagccagccaga
aatagccctacccaaagtcgaagagagacgcgcagacgcagtcccagtcccactccaagt
cgtagagagccagccagtcccagtcccactccaagtcgtagagagccagccagtcccagt
cccactccaagtcgtagagagccagccagacccagccctacgtccagccggagagagaca
cccagaccagaacccaccaccacccctacccccggtgctgttacccaagccaccccagcc
tcaggagctttcagccggatgggatccatagcaagtctcttccgctcccatcgacgtgcc
acaccggcacctgggccagtcaacaacaacactggtggagttgacccatgggggatgggt
gcactgactgaatcccaaccggaagtgaataccagccttttcctggatccgccgacccct
gaccccatcatgaatcagatgccagctttccctgcattgagggagatagacatctccagc
atccaggccccagagcccaggagcagagaggagttcctgcagtatgcctgtaccctgacc
ctagacacgaggacagcccaccggcgtctgaccctgtcggagagcaacaccaaggccacc
ctacagggggcagggcagccctacccagactgcccccaacgcttcgacggctggacccag
gtgctgtgccaggcccctctttccgcccagcgatgttactgggaggtggattggaggggg
aaggggtcatcaatgggcgtggcttatggagccctgagcaggaagggggcggacgccagg
gcggggcttggctacaacgcccaatcatggagcctggagctgtcggatacgtgttgcacg
gcaatgcatgacaatgagaagagggacatcccggtgacgtactcgccgcgtctggggttg
ttcctggacctcaacgcgggcaccctggcgttctatagcgtggcggagagcatggggcac
ctgcacacgttccgtgccaactttacacagccactgtatgcggccttcggggtgggaagt
ggggttggtgttggactggacttcgctctgggtcagttcagccagacatccgacagcatc
aagatctgccccatgtga
DBGET
integrated database retrieval system