KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372423
Entry
139372423         CDS       T10872                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    139372423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139372423
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139372423
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    139372423
SSDB
Motif
Pfam: PRY SPRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-C3HC4_2 ANCHR-like_BBOX zf-RING_5 DUF948 MRP-S31 BLOC1_2 ALMT zf-RING_6 DUF4363 CCDC22_CC 5_nucleotid IBR_1
Other DBs
NCBI-GeneID: 139372423
NCBI-ProteinID: XP_070968236
LinkDB
Position
18:complement(7013033..7025315)
AA seq 845 aa
MSGNLWTEEQFNCPVCLDLPNEPVTIPCGHSYCMGCIKDYWSKDNPRSPGVYSCPQCRQT
FCPKPSLSRNTMLAEAVEQLRKGALTTSARESIRSAHRANTMGRAKGSSRSGGVSRLPAM
AVPCDMCHGAGDQRAAVKSCLVCMASYCEAHLKPHQTKAELKKHELIAPTGKLAQKICTE
HKYLQEFYCRQCQIFVCWLCTSNQHKDHETTSTKAERTERQKELAEVQTENHQRLKEREG
ELKDMKKMLEATKRSADRVHDDTETVLSELQRSVERLQELVEGVMNQAGQEKVSEAQDVV
DKLEAEISELKRRDKDMKEVFRCEDNIHFLETCESLCSPFECNDLSCVVANPEATFEPVR
EAILNLRERVEDMCNVELGKITKTVNDTTLFTLGDKAKKNGVQKTGGFRSLFSGLGSKTT
TTNNNRPAAPTPTVSVAVRGPNSRADRDRPRREEREPAREAAPRPSTRSSPTQRRKKPAR
NSPTQSRRETRRRSPSPTPSRREPASPSPTPSRREPASPSPTPSRREPARPSPTSSRRET
PRPEPTTTPTPGAVTQATPASGAFSRMGSIASLFRSHRRATPAPGPVNNNTGGVDPWGMG
ALTESQPEVNTSLFLDPPTPDPIMNQMPAFPALREIDISSIQAPEPRSREEFLQYACTLT
LDTRTAHRRLTLSESNTKATLQGAGQPYPDCPQRFDGWTQVLCQAPLSAQRCYWEVDWRG
KGSSMGVAYGALSRKGADARAGLGYNAQSWSLELSDTCCTAMHDNEKRDIPVTYSPRLGL
FLDLNAGTLAFYSVAESMGHLHTFRANFTQPLYAAFGVGSGVGVGLDFALGQFSQTSDSI
KICPM
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgagtggtaatctgtggacggaggagcagttcaactgtcctgtgtgcctggacctcccc
aatgagccagtcaccatcccgtgtggccacagctactgcatgggctgcatcaaggactac
tggagcaaggacaaccctcgctcccctggagtctacagctgcccccagtgccgccagaca
ttctgtcccaagccctccttgtccaggaacaccatgctggcagaggccgtggagcagctc
cgcaagggggccctcaccacctccgccagggagtccatccggagcgcccaccgtgccaac
accatgggtagagccaagggaagttcccgtagtggtggtgtcagcaggctgccagccatg
gccgtgccctgtgacatgtgccacggcgctggagatcagcgggctgcggtgaagtcttgc
ctggtgtgtatggcgtcctactgcgaggcccacctgaaaccgcatcagacgaaagcggag
ttgaaaaagcatgagctgattgcgcccacgggcaagctggcgcagaagatctgtaccgag
cacaagtacctgcaggagttctactgtcgccagtgccagatttttgtgtgctggctgtgc
accagtaaccagcacaaggaccatgagaccacctccaccaaggcagagcgcacggagaga
cagaaagagctggctgaggtgcagacagagaatcatcagagactgaaagaaagagaagga
gagctgaaagacatgaagaagatgctggaggcaacaaagcgctcagcagacagggtacat
gatgacacagagacggtgctgtcggagctccagcgctcagtggagaggctccaggagctg
gtggagggtgtgatgaaccaggctgggcaggagaaagtaagcgaggcccaggacgtggtg
gacaagctggaggccgagatctcggagctgaagaggagagacaaggacatgaaggaggtg
ttccgctgtgaggacaacatccacttcctggagacctgtgagtctctgtgcagcccgttt
gagtgtaatgatctgtcgtgtgtggtggccaatccagaggctacgtttgagcctgtacgt
gaagccatcctgaacctacgggagagagtggaggacatgtgcaacgtggaactgggcaag
atcaccaagacagtgaatgacacaacactgttcaccttaggagacaaagcaaaaaaaaat
ggcgtccagaagacgggagggttcaggagtttgttttctggtctgggatccaaaacaaca
acaacaaacaacaaccgtcctgcagctcccacaccgactgtctccgtggcggttcgagga
cctaactcacgtgctgacagagacaggccgaggagagaggagagagaaccagccagagag
gcagcccccaggccaagcaccagatctagtcccactcagaggcggaaaaagccagccaga
aatagccctacccaaagtcgaagagagacgcgcagacgcagtcccagtcccactccaagt
cgtagagagccagccagtcccagtcccactccaagtcgtagagagccagccagtcccagt
cccactccaagtcgtagagagccagccagacccagccctacgtccagccggagagagaca
cccagaccagaacccaccaccacccctacccccggtgctgttacccaagccaccccagcc
tcaggagctttcagccggatgggatccatagcaagtctcttccgctcccatcgacgtgcc
acaccggcacctgggccagtcaacaacaacactggtggagttgacccatgggggatgggt
gcactgactgaatcccaaccggaagtgaataccagccttttcctggatccgccgacccct
gaccccatcatgaatcagatgccagctttccctgcattgagggagatagacatctccagc
atccaggccccagagcccaggagcagagaggagttcctgcagtatgcctgtaccctgacc
ctagacacgaggacagcccaccggcgtctgaccctgtcggagagcaacaccaaggccacc
ctacagggggcagggcagccctacccagactgcccccaacgcttcgacggctggacccag
gtgctgtgccaggcccctctttccgcccagcgatgttactgggaggtggattggaggggg
aaggggtcatcaatgggcgtggcttatggagccctgagcaggaagggggcggacgccagg
gcggggcttggctacaacgcccaatcatggagcctggagctgtcggatacgtgttgcacg
gcaatgcatgacaatgagaagagggacatcccggtgacgtactcgccgcgtctggggttg
ttcctggacctcaacgcgggcaccctggcgttctatagcgtggcggagagcatggggcac
ctgcacacgttccgtgccaactttacacagccactgtatgcggccttcggggtgggaagt
ggggttggtgttggactggacttcgctctgggtcagttcagccagacatccgacagcatc
aagatctgccccatgtga

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