Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372487
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Entry
139372487 CDS
T10872
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139372487
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
139372487
NCBI-ProteinID:
XP_070968308
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All DBs
Position
18:17513830..17530566
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AA seq
986 aa
AA seq
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MLWLSLLSVVVLGCVTPTQTHTHTHTPTPTSTHTPMVDSSEEEVDEPCFEPCTCEVKEGV
LHVHCDGRGFTNASQVSQSWLRPFKLNLQRNSLRRLYSNGFLHHSNAVAINLGNNALQDI
RAGAFHGLGTLRRLYLHENKLEVFRNDTFSGLEALEYLQADYNVIKRIDSGALRYLLKLR
VLILNDNLIPALPPHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWIC
GCEAVQLQTWLGHIPYTAVVGDITCEYPFHLHGKDLREIPRKALCAGEVEGEGEKEGERE
KHGGVQPPQHPPSNPKANPKPGRPRPTKPSSMVHHQNTHTSSSSTSSSSVERRGRERSPR
PTKRPRPSRTPPTQRSLLPNQPPPIAGYQTRPPIPIICPLGCTCNLHISDLGLTVNCKES
GFHNVSQLTPRPLNGRKLYLSGNLIQRIYKSDFWNFSSLDLLHLGNNRISFIQEGAFSSL
PTLRSLYLNGNNLQRLSPHMFLGLLNLRYLYFEYNEIGVVEAGAFSPMPSLQLLFLNANL
LRSLPIGVFQGISLSRLNLRNNHFLSLPVEGVLEHLTGLVQVDLQQNPWECRCDAAPLKR
WLEGLSAVVVVGEVVCHSPEETTGTDLRSLSLDLLCPDLDTHQATVENQGEWNSSTAPDG
DFSLGYPVPGHGPLGPITKASIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRHKLPFRR
QGEVDLAGIQMECGIFTEQQHHRLPVSKTPLPPLSALQHSLVYDSILPVVPGPNPNLSPS
THMCSSPVYKNEDDSVVKQQWQQQKQLSASKEKGNVGRYPSAGERESEGHYRFVAERERE
CNMEVSHPPISTVAGAVGPPLSDLRGNGTLCPTVIDSQGPTPKVGLVDCLFGISGMSAAV
PEFRDLPDRYTRPPPPRYSHPPQPPQPPEPKEETRASQSLVVTTMTACTGPSSSNQSQNS
EFPRELRMRLSTKPDYMEVLDRSYQF
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctctccctgctgtctgtggtggtcctgggttgtgtgaccccgacccagaca
cacactcacacacacaccccgacgcccacctccacacacacccctatggtggacagctcg
gaggaggaggtggacgaaccgtgcttcgagccgtgcacgtgcgaggtcaaagagggcgtg
ttgcacgtgcactgtgatgggcggggcttcactaacgccagccaggtgtcccagtcctgg
ctccgccccttcaagctcaacctgcagaggaactccttgaggcgtctctatagcaacggc
ttcctgcaccatagcaatgccgtggcgataaacctaggcaacaacgcgctgcaggacatc
cgtgccggggcgtttcatggtctagggacactgagacgcctctacctccacgagaacaag
ctggaggtgttccgcaacgacaccttctctggcctggaggcactggagtacctgcaggcc
gactacaatgtcatcaaacgcatcgacagcggggcactacgctacctgcttaaattacga
gtgctcatcctcaatgacaacctgatccctgctctgcctcctcacctcttcagatctgtg
tctctgacccacctggacctgcgggggaaccgtctgaagagcctggcctacgccgggacc
ctggagtatgtgggccgtagcctgatggagctccagctggaggagaacccctggatctgt
ggctgtgaggctgtccagctgcagacctggcttggacacatcccctacaccgcagtggtg
ggggacatcacctgcgaataccccttccacctgcacgggaaagacctgagggagatacca
cgcaaagcactgtgtgccggagaggtggagggagagggggagaaagagggagagagggag
aagcacggaggggtacagcctcctcagcatccgccctctaacccaaaagcgaaccccaag
cctgggaggcccagacccaccaagccgtcctccatggttcaccatcagaacacacatacc
tcatcttcgtcaacttcttcatcatcggtggagcggagggggagagagaggtcccctcgg
cccactaagcgtcccaggccctccaggacaccccctacccagcgtagcctcctccccaac
cagccccctcccatcgcagggtaccagactcgcccccccatccccatcatatgtcctctg
gggtgcacctgtaacctccacatctcagacctagggttgacagtcaactgtaaggagagc
ggcttccataatgtgtcccagcttacgccacgccccctcaacggacggaagctgtacctc
agcggcaacctcatccagcggatctataagtcagatttctggaatttttccagtctggat
ctacttcacctgggaaacaacaggatctcctttattcaggagggagcgttctccagcctg
ccgaccctgaggagtctctacctgaacggcaacaacctgcagaggcttagcccacacatg
ttcctgggtctacttaacctcaggtatctgtactttgagtacaatgagatcggtgtggtg
gaggcgggagcattcagccccatgccgtctctccagctgctcttcctcaacgccaacctg
ctgaggtcacttcctatcggagtgttccagggcatctccctctctcgcctcaacctccgc
aacaaccacttcctcagcctgcctgtagagggggtgttagagcacctcactggactggtg
caggtggacctgcagcagaacccatgggagtgccggtgtgatgcggcccctctgaagcgc
tggctggagggcctgagtgcggtggtggtggtgggggaggtggtctgtcactcaccagaa
gagaccacaggtacagaccttcgctctctttccctggacctcctctgtccagacctggac
acccaccaggccacggtggagaaccagggagagtggaacagctccacagccccagacggt
gatttctctctgggctaccctgtgccaggccatggccccctgggtcccatcaccaaggct
tccatccctctgtcggtgttggtgctcagcctgctggtgctgttcgtgtcggcgttcttt
gcggcagcggcgctgatcgcctatgccctgaggaggcggcacaagctgccgttccggcgg
cagggagaggtggatctggccgggatccagatggaatgtgggatattcaccgagcagcag
caccacaggttaccggtatcgaagacccctcttcctcctctgtctgccttgcagcatagc
cttgtctacgatagcatcctccccgtcgtccctggccctaaccctaacctcagtccctca
acacacatgtgcagtagcccagtctataagaatgaggatgattcagtggtgaagcagcaa
tggcaacaacagaagcagctctctgcttctaaagagaaagggaacgtgggaagatacccc
tcggcgggggagagagagagcgaaggacactatcgttttgtggcagagagagagcgagag
tgtaacatggaggtgtcccatccccccatcagtaccgttgccggggcagtgggaccccct
ctttcagatctccgtggaaacgggaccctctgcccaacggtcatagacagccagggcccc
acccccaaggtgggattggttgactgcctgtttgggatctctggaatgtccgccgccgtc
ccagagttccgagacctgccggacaggtatacacgtcccccaccaccccgctattcccac
cctccacaaccccctcagccccccgaacccaaagaggaaactagagccagccaatcactc
gtggttactacaatgacagcgtgcacggggccaagcagtagtaatcagagccagaactca
gagtttccacgagagttgagaatgagacttagtaccaagccagattacatggaagtcctg
gacagatcttatcagttctaa
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