Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372506
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Entry
139372506 CDS
T10872
Name
(RefSeq) claudin-10-like isoform X1
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecules
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139372506
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139372506
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139372506
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139372506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139372506
04147 Exosome [BR:
ocla04147
]
139372506
04515 Cell adhesion molecules [BR:
ocla04515
]
139372506
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139372506
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139372506
Exosomal proteins of colorectal cancer cells
139372506
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
L1 family
139372506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
Motif
Other DBs
NCBI-GeneID:
139372506
NCBI-ProteinID:
XP_070968333
LinkDB
All DBs
Position
18:18918831..18921849
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AA seq
277 aa
AA seq
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MCILGIGPEVEVQRLEHRALPVEHKPGYDILTTDTIHLLTIHPGLTLLSIHYLQLHRQSH
LPQLLLTSLPDPALQQTGQDYPRRMSNMATEIVAFILTISGWILVCSTLPTDYWKVSSVD
GTVITTATFWSNLWKTCVTDSTGVSNCKDFPSMLALDAYIQVCRGLMIASVCLGFFGATL
ALMGMKCTRIGGSESTKARLTGLSGLHFILNGLCSLTACSLYAHRITSEFFDPLFFAQKF
ELGAALFIGWAGSVLCISGGLIFCLSLSEGFRQVCTI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatccttgggattggtccagaggtagaagtgcagaggcttgaacacagagccctc
cctgttgagcataaaccaggctacgacatcttaaccacggacacaattcacctcctaacc
attcatcctggactgactctgctctccatccactatcttcagctccacagacagtctcat
ctgccgcagttgctgttaaccagcttacctgacccagctctacaacagacaggacaggac
tatccgaggaggatgagcaacatggccacggagatcgttgccttcatcctgaccatatct
ggatggatcctggtctgctccacgttgcctactgattactggaaggtgtcctccgtggat
gggacagtcatcaccacggcgaccttctggtccaacctgtggaagacctgcgtcacggat
tctacaggagtgtccaactgtaaagatttcccctccatgctggctctggatgcgtatatc
caggtgtgtcggggcctgatgattgcgtctgtgtgcctggggttctttggagccaccctg
gccctgatgggaatgaagtgtaccaggatcggtggctcagagagcaccaaggccagacta
acaggcctctcaggccttcacttcatactcaatgggctttgctccttgactgcatgctcc
ctgtacgcacacaggatcacatcagagttctttgacccactcttttttgctcaaaagttt
gagctgggcgcagcgctcttcatcggctgggctggctcggtgctctgcatttcaggagga
ctcatattctgcctctccttgtcagagggcttcaggcaagtttgtacaatttaa
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