Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372514
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Entry
139372514 CDS
T10872
Name
(RefSeq) ras-related protein Rab-9A-like
KO
K07899
Ras-related protein Rab-9A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139372514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139372514
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139372514
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
139372514
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
139372514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
AAA_7
AAA_16
TIR_2
FeoB_N
Motif
Other DBs
NCBI-GeneID:
139372514
NCBI-ProteinID:
XP_070968343
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All DBs
Position
18:complement(19822161..19825780)
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AA seq
201 aa
AA seq
DB search
MTAKSSLLKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKELEVDGRTVTLQI
WDTAGQERFRSLRTPFYRGSDCCLLTFSMDDNQSFHNLNNWKKEFAYYADVKEPEKFPFV
ILGNKLDVPERQVSGEDARQWCRDNGGHPYFETSAKDSTNVAAAFEEAVRRVLAQEEGGE
HLIPTDTMDLHRKPRSGASCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaagtcgtccctgctcaaggtgatcctcctgggggacggcggcgtgggcaag
tcctctctcatgaaccgctacgtcaccaacaagtttgacacgcatctcttccacaccatt
ggcgtggagttcctaaacaaggagctggaggtggacgggcgcaccgtgacgctccaaatc
tgggacacggcaggccaggagcgcttccgctcgctccggacacccttctaccgtggctcc
gactgttgtctcctaaccttcagcatggatgacaaccagagcttccacaatctcaacaac
tggaagaaggagtttgcctactacgctgatgtcaaggaacccgagaagttcccattcgtg
atcctgggtaataagttggatgtgccagagaggcaggtttcaggcgaggacgcccgccag
tggtgccgcgacaacggcggccacccgtactttgagacaagcgccaaggactcgaccaac
gtggcggcggcgtttgaggaggcggtgaggagggtgctggcgcaggaggaagggggggag
cacctcatcccgacggacacaatggacctgcacaggaagccacgctctggcgcctcctgc
tgctga
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