Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372541
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Entry
139372541 CDS
T10872
Name
(RefSeq) SH3 domain-binding protein 4-A
KO
K20066
SH3 domain-binding protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139372541
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
139372541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPA_SH3BP4
SH3BP4_C
DEATH_SH3BP4
SH3_2
SH3_1
SH3_9
ZU5
Pox_RNA_Pol_22
Motif
Other DBs
NCBI-GeneID:
139372541
NCBI-ProteinID:
XP_070968380
LinkDB
All DBs
Position
18:24615890..24642967
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AA seq
981 aa
AA seq
DB search
MAAHRIIRVTNSNHVLPRCKSEGTLIDLNEGLSEASLTDVKVPSSSALRLDNSASFVTAH
EVVAIKDYCPSSFTTLKFSKGDRLYVMDTSGGEWWYAHNNTEMGYIPSAYVQPINCRNSS
LSDSGMIDNLGECTEEGAKELDLLGEWTGVSVKTTPYSPYFNSNPFSLHTSSTNPFINSG
HLHGSLDQNCNERGRSTDLLVFDSLASPVSPSGPNSTSRTTMINGFSSCNIFDMMSATSP
NQDLQVLQTLRRDNPFFRSKRSYSLSELSILQTQSNPPLPSSGFFTGLKAPSPEQFQSRE
DFRTAWLNHRKLARSCHDLDSLGQSPGWGQTQPVETNIVCKLDSRGGAVQLPETQISVHV
PEGHVDPGDSQQISMKALLDPPLELNNDHCSTVSPVVEIKVSNMETKSFITLEMTVSVTV
KKDSGQVAEVLCVRSDCKEGPYIIIPHAYLYKDTVQVQLDNLEPCMYVVVVVQAQHLNLN
TTVWDNVLKKVTLGVYGPKHIHPSFKTVVALFGHDCAPNTLLVSEVGKQAHSSPPVALTL
WGKHQFVLGRPQDLQVGLYSNMSNYMIKANEQTRMIRAFQVKLGKVSRLIYMITSNNPED
ISDFTLQVQVKDGLDCILAQFCVQTPQPPPKSGARNTGHRRFLKKKEVVGKILLSPLAIT
AKYPQFQERCITNLKFGKLLKSVIRQNKSTYLLEYKKGDVIALLSEEKIKLRGQLWTKEW
YIGYYQGKTGLVHAKNVLVLGKVKPIYFCGPDLTTTMLVEQILKPCKFLTYIYASVRTVL
MENIGNWKTFADALGYGNLPLSCFCRTELDNEPEKVASVLEKLKEDCTNMDIKERKTFQK
ELMTALLKMDCQGLVARLIMDFVLLTTAVEVAPRWRELAEKLARVNKQQMEQYDAPHRDK
NGLVDNESMWKPAYDFLLTWAAQIGDSYRDVIQELHLGLDRMKNPITKRWKHLTGTLILV
NSLDTLRSSAFSPVGQGDYAI
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaccggatcatcagagtgaccaacagtaaccatgttctccctcgctgcaaa
tcggagggcacgctcattgatctcaacgaagggctctctgaggctagcctcacagatgtc
aaagtgccttcttccagtgccttacggctggacaattcagcttcctttgtaactgctcat
gaagtagtcgccatcaaggattactgcccatctagctttaccactttaaagttttccaaa
ggtgaccggctttatgtgatggacacgtcgggtggagagtggtggtatgcccacaacaac
acagagatgggctacatcccctcagcatacgtccagcccatcaactgtaggaactcatcg
ctcagtgatagtggcatgatagacaatctaggggagtgtacagaggaaggggctaaggaa
ttggatctcctaggggagtggacaggggtgtcagttaagaccactccttattcgccttat
tttaacagcaatcccttctccctccatacctcctccaccaaccccttcatcaacagtggt
catctacatggttctctggaccagaactgtaatgagaggggaaggtccacggacctgtta
gtctttgactccctggcctccccagtctccccttcgggacctaactctacctccaggacc
accatgatcaatggcttcagtagctgcaacatatttgacatgatgtcagccaccagcccc
aaccaggacttacaggttttacagacactgcgaagggataacccattcttcaggagcaag
cgatcgtacagtttatcggagttgtccatcctacagacacaatccaacccccccttgcct
tcttccgggttcttcaccggcctcaaggctccctcgccagagcagtttcagagcagggag
gacttcaggactgcgtggctaaaccatcggaagctggccagatcttgccatgatctggac
tctctggggcagagccctggttggggacagactcagccggtggagaccaacattgtctgt
aaactagacagtcgtggaggggccgttcagctcccagaaacccaaatcagcgtccatgtc
cctgaaggacacgtggatcctggagacagccagcagatctccatgaaggccctactggac
cctccactggagctgaacaatgaccactgctccacagtcagcccagtggtggaaatcaaa
gtgtccaacatggagaccaagtccttcatcactctggagatgaccgtgtccgtgacggtg
aagaaagacagtggtcaggtagctgaggtgctctgcgtccggagtgactgcaaggaggga
ccctatataatcatcccacatgcttacctatacaaggacacagtacaagtccagttggat
aacttggagccgtgtatgtacgtggtggtagtggtgcaggcccagcacctcaaccttaat
acaactgtatgggacaatgtgttgaagaaagtcaccctgggtgtctatgggcccaagcac
atccatccttcatttaagacagtcgtggccctatttgggcatgactgtgcccctaatacc
ctactggtgagtgaggtggggaagcaggcccactcctcccctccagtggcgctcacgctg
tgggggaagcatcagtttgtcctgggtaggccccaggaccttcaggttggcctatactcc
aacatgtctaactatatgattaaggctaatgagcaaaccaggatgattcgggccttccag
gtcaaactggggaaggttagccgactcatttacatgatcacatccaacaaccctgaggac
atatcagacttcaccttgcaggtccaggtcaaagacggcctggattgtatcctggctcag
ttctgcgtccaaacaccgcaacctcctccgaagagtggagcgcggaacactggccacagg
cggttcctgaagaagaaagaggtggtgggtaagattcttctgtcacctctggccatcact
gccaaatatccacagtttcaggagcgctgcatcaccaacctgaagtttggcaagttgctc
aaatctgtgatcaggcaaaacaagagcacatacctgttggaatacaagaagggagatgtg
atcgccttgctgagcgaggagaaaatcaaactacgaggacaactgtggaccaaagagtgg
tatattggatattatcagggaaagaccggtcttgttcacgcgaaaaacgttctggttttg
gggaaagtcaagcctatttatttctgtggtccggacctcacaacaaccatgctagtggag
cagattttgaagccttgcaaattcctcacatacatctacgcctctgtgaggacagtactc
atggaaaatatagggaactggaagacctttgcagacgcactgggatatgggaacttacct
ttgtcttgtttctgtcggactgaactggacaacgagcctgagaaggttgcctcggttttg
gagaagctcaaggaggactgcactaacatggacatcaaggagagaaagaccttccagaag
gaactcatgacagccctgttgaagatggactgccaaggtctggtggccaggctgatcatg
gactttgtcctgctgaccacggccgtggaggtggccccgcgctggagggagctggcggag
aagctggcccgggtgaacaagcagcagatggagcaatacgatgctccgcacagggacaag
aacggcctggtggacaatgagtcaatgtggaagccagcctacgacttcctgctgacctgg
gcggcccaaattggggacagctaccgggacgtgatccaggagctgcacctgggcctggac
cgaatgaagaatcccataaccaagcgctggaagcacctcaccggaacgctcattctggtc
aacagcctagatacgttacgcagctctgccttcagccctgtaggacagggggactatgcc
atttga
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