Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372568
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Entry
139372568 CDS
T10872
Name
(RefSeq) adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04115
p53 signaling pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139372568
09143 Cell growth and death
04115 p53 signaling pathway
139372568
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139372568
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139372568
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139372568
Peptidases and inhibitors [BR:
ocla01002
]
Mixed peptidases
Family P2
139372568
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Others
139372568
G protein-coupled receptors [BR:
ocla04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
139372568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
AGRB_N
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
139372568
NCBI-ProteinID:
XP_070968412
LinkDB
All DBs
Position
18:complement(30872484..30893481)
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AA seq
1537 aa
AA seq
DB search
MTWSPPQSGPFVALLALLFLGLTSSVPSGPASDTCASLEQSRFFGLFSSTANLPSTPCSW
TLQNPDPRRYTVYMKITKPTDSCLPRQVKTFQFDSFIETSRTYLGMESFDEVVRLCDAST
SVTYLESSKQFLQLRKVAPRHGLEIVEGESSGEFKAEFLVVGKRNPSMPACQKLCQWLEN
CLSTSTHLNPCGIMNTPCQCWETPVRKPGGCYRGGVYLEKCIPTPRDTGREIVRDAEIIK
GWSGWGRWSECSMECGGGVQVRSRACQPEDSVCEGVVEEGRACNPQPCIGQVHSRSQALA
SIVGLKRDNTDVPITGVVAPQTVDAAAVADEWSPWSVCSVSCGEGWQARSRFCVTSSYST
QCTGPLRENRPCNNTMVCPVDGAWDEWSPWSLCSSTCGRGYRDRTRICKQPQNGGEPCKG
PIKQTKFCNIAVCPVDGAWNEWSGWTTCSTSCSNGTKQRTRECNGPSYGGSECRGDWRET
NNCFLKDCPVDGRWLSWSSWGSCSKTCGGGSQQRQRMCEGPYFSGETCPGERGELRRCNE
KRCPEPHEICQEETDGDVVWKRTPAGDMAAVTCPTDSTGMILRRCTLGAVGLAYWENPTH
IKCISKNYQDISLLAQHGVDKAQKGLMADGISEVISRLRATSDEGTKYSGDLLSIMDVLR
NTTEIYKGVGYSLSNADVENYAQTISNLLKEEHHDKWEEAQLMGTNIKEFLQLVEDFVDM
IGMQMKDFQDIYEVTENLVLSIHKRPTTMTTDFIFPVRGWRGMMDWVRTSEEKITVSRDA
LSIDQSEGTTAFVTGIILYRNLSSILSFQSNSTVLDSKVVTVMVKPTPGLLSPPVEIEFP
HQHNDTINETCISWDESETSSLLGSWSARSCRAVAVDSFRTKCVCDRLSTFAILARLNPD
MNMDKNLLPSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALI
LVGQTQARNKVVCGVVAALLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGW
GLPALVVAVSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLV
SKDGITDVKLKERAGASLWSSCVILPLLALTWMSAVLAMTDRRSALFQILFAVFDSLEGF
IIVMVHCILRREVQEAVKCRVVDRKDDGNGDSGSSIQNSHHTQLMSDFEKDAESNRPGGM
NSSCEEKMPLPPQLPLPMSSNFHTLPSHTTKAHMQAVPEYSSHTLTLKREKSWLHGGMDP
SSCGKPIYVCDGELFQQLDADLVCGQAEGSCPDGSGYLLLPNTTSTLRKAKEDPSKYNIS
VEQLPQTRLVHLSGPFAEPQAAFGLKTLPSDRVSVSYSERDSPIQNIHNMSSESHITHSS
LGDTFDSMNSMMSKSETISTLSMSSLERQKSRYAELDFEKIMHTRKRHQNMFQDLNRKLH
HAEKQDRESPASDSKSVRWSVSSGGSDKTNHSDKQQQQVERPWDGVQRTQHSPPAWVRKD
LEPLAVSPLHMQQVEWEKAGATISMVSQDIIDLQTEV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtcacctccccagtccgggccctttgtggcccttttggcccttcttttcctc
ggtttgacttccagcgtcccttccggcccagcctctgatacctgcgcctccctggagcag
agccgcttcttcgggctgttctcttcgaccgccaacctgccctccacgccgtgctcctgg
accctgcagaacccagaccctcgccgctacaccgtctacatgaagatcaccaagcccacc
gactcctgcctgccccgccaggtcaagaccttccagttcgactccttcatcgagacctct
cgcacctaccttggtatggagagctttgatgaagtcgtcagattgtgtgacgcttcaact
tctgtaacctacctggagtccagcaagcagttcctgcagctccgcaaggtggcgccaaga
cacggcctggagattgtggagggagagagcagcggcgagttcaaggccgagttcctggtg
gtgggcaagaggaaccccagtatgccagcctgtcagaagctgtgccagtggctggagaat
tgtttgtccaccagcacccatctcaacccctgcggcatcatgaacaccccctgccagtgc
tgggagacccccgtcaggaagcccggcggctgctaccgtggaggcgtctacctggagaag
tgcatcccaaccccccgagacactggacgtgaaattgtacgcgacgccgagatcataaag
ggctggagtgggtggggccgctggtctgagtgcagtatggagtgcgggggtggagtccag
gtgcgcagccgagcctgtcagccagaggatagtgtgtgtgaaggcgtggtcgaagagggg
cgggcctgcaaccctcagccctgcattggtcaagtgcacagccgtagccaagccctggct
tccatcgtcggcctgaaaagagacaacactgatgttcctatcactggagttgtggcccct
caaacagtggatgctgctgcggttgcagatgagtggtccccctggagtgtgtgttcagtg
agctgtggagagggctggcaggcccgctcccgtttctgtgttacctcctcctacagcacc
caatgcaccggccccctccgcgagaaccggccctgcaacaacaccatggtctgccccgtt
gatggagcttgggacgagtggtccccatggagcctgtgctcttccacctgcggccgtggt
taccgtgaccgcacccgcatctgcaagcagccccagaacggaggagaaccctgcaaggga
cccatcaaacagaccaagttctgcaacatcgcagtctgcccagtggacggtgcctggaac
gaatggtctggttggaccacctgctccacctcttgctccaatggcaccaagcagaggaca
cgtgaatgcaacgggccgtcctacggaggttcggagtgccgtggtgactggcgtgagacc
aataactgcttcctgaaagattgcccagttgatggacgctggttgtcgtggagctcatgg
ggaagctgcagtaagacctgtgggggaggaagccagcagagacagaggatgtgcgaagga
ccttacttcagtggagagacttgccctggagagagaggagagctgagacgctgcaacgag
aaaagatgcccagaaccccatgagatctgtcaggaggagaccgatggtgatgttgtgtgg
aagagaaccccagcaggagatatggcggccgtgacctgccctacagactccaccggcatg
atcttgcgccgatgcacccttggcgctgtaggccttgcttattgggagaacccgacccac
atcaagtgcatctccaagaactaccaggacatttccttgttggcccagcatggtgttgat
aaggctcagaagggcctgatggctgatgggatttctgaggtgatctcccgactgagggcc
acctctgatgaggggaccaagtacagcggagacctgttgtccatcatggatgtactcagg
aacaccactgagatctacaagggagtcggatacagcctgagcaatgctgatgtggagaac
tatgcccagacaatcagcaacttactgaaggaggaacatcatgacaaatgggaggaggca
cagctgatgggcactaacatcaaggagttcttgcagcttgtcgaggactttgtggacatg
atcggtatgcagatgaaggacttccaagacatttatgaagtcaccgagaatttagtgttg
agcatccataagcgccccacaaccatgaccaccgacttcatcttcccagtgagaggatgg
agaggcatgatggactgggtcaggacctcagaggagaagatcactgtttcccgtgatgct
ctgtccatcgaccagtctgagggcaccactgcatttgtgaccgggatcattctctacaga
aacctcagctctatcttgtccttccaaagtaacagcaccgtcctcgactccaaggtagtc
acagttatggtcaagcccaccccaggcctgctgtcccccccagtggaaatcgagttcccc
caccaacataatgacaccataaatgaaacttgcatctcctgggatgagagtgaaacttct
tcgctgcttggatcttggtctgcgcgtagctgcagagcggtcgctgttgattcattcaga
accaaatgcgtgtgtgacaggctctccaccttcgccattttagcgcgtctaaaccctgat
atgaacatggataagaatcttcttccctctgtgacactcatcgtgggctgtggggtctcc
tctctcacccttctgctcctcatcattatctatgtctccgtctggaagtatatccgctcg
gagcgctcagtgatcctcatcaacttctgcctctccattatctgctccaatgccctcatt
ctggttggacaaacccaggctcgcaacaaggtggtgtgtggtgtggtggctgccctcctt
cacttcttcttcctctcatctttctgctgggtgctgacggaagcgtggcagtcctacatg
gctgtcacgggccgtctgcgcaaccgcatcatccgcaagcgtttcctctgcttaggctgg
ggactccctgctctggtggtggctgtgtctgttggatttaccaaggctaagggatatggc
accgtcaactactgctggctctctctggagggtggactcctctactcgttcgttgggccc
gctgctgctgttgttctggtgaacatggtaattggcatcctggtcttcaacaaactggtg
tccaaggacggcatcaccgatgtcaaactgaaggagcgggcgggagcgtccctgtggagc
tcctgtgtgattctgcccctgctggccctcacctggatgtccgctgtcctggccatgacc
gaccgccgctccgctctcttccagatcctcttcgctgtctttgactccctggaagggttc
ataatcgtcatggtgcactgcatcctgcgtagagaggtccaagaggcagtgaaatgcaga
gttgttgaccgtaaggacgatggcaatggagattctggcagttccatccaaaatagccac
cacacccagctcatgtctgatttcgagaaggatgctgaatccaacagacctggtggtatg
aactcctcctgtgaggagaagatgcccctcccacctcagctgcccctccccatgagctcc
aacttccacaccctgccctcccacaccaccaaggcccacatgcaggccgtgcccgagtac
tccagccacaccctcactctgaagagggagaagagttggctgcatggcggcatggacccg
tcctcctgtgggaaacccatttatgtgtgcgacggtgagctcttccagcagctggatgcc
gacctggtgtgcggccaggcggaggggagctgccccgacggtagcggctacttgctcctg
cccaacaccacctccacccttcgcaaggccaaagaggacccgtcaaagtacaacatcagc
gtggagcagcttccacagaccaggctggttcatctcagtgggcccttcgctgagccccag
gctgccttcggactcaagacgctaccgtccgaccgtgtcagcgtgtcctactcggagagg
gactctcccatccagaacatccacaacatgtccagcgagtctcacatcacccacagcagc
ctgggagacaccttcgactctatgaactccatgatgtccaagagcgagaccatctccaca
ctgtccatgagctccctggaaagacagaagtcccgttatgctgaattagatttcgagaag
atcatgcacacaaggaaacgtcaccagaacatgttccaggacctcaacaggaaattacat
cacgctgagaaacaagacagagagtcccctgcttcagacagcaagtctgtgagatggagt
gtgtcctctggaggaagtgacaaaacaaaccacagcgacaagcagcagcaacaggtggag
agaccctgggatggggtccagaggacgcaacattcaccgcctgcctgggtgcggaaagac
ctagagcccctggccgtgtcgcccctgcatatgcagcaggtggagtgggagaaggctgga
gccaccatctcaatggtcagccaggacatcatcgacctgcagacggaggtctga
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integrated database retrieval system
