Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372577
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Entry
139372577 CDS
T10872
Name
(RefSeq) thyrotropin-releasing hormone receptor b
KO
K04282
thyrotropin-releasing hormone receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139372577
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139372577
04081 Hormone signaling
139372577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139372577
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
139372577
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SSDB
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
7tm_4
Bac_export_2
DUF6556
DUF4834
Motif
Other DBs
NCBI-GeneID:
139372577
NCBI-ProteinID:
XP_070968423
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Position
18:33089224..33092884
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AA seq
399 aa
AA seq
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MENVTEAQENQTWGTWTDQIIEYKVVSTLLVFVICAFGIVGNVMVILVVLTTKHMRTPTN
CYLVSLAVADLIVLTAAGLPNITDSIFGSWVFGRSGCLGITYLQYLGINASSCSITAFTI
ERYIAICHPIKAQLLCTLSRAKKIILFVWVFTLLYSVMWFYLSDIKEESYENGVTIVTCS
YKVSRQLYVPIYFLDFGIFFVVPLMLSTILYGLIARILIMNPLPSERKDKSKNEQSNTTS
GCKNSHHTSTTATSRRQVTKMLAVVVILFAVLWMPYRTLVVVNSFLEQAYMNTWFILFCR
SCVYINSAINPIIYNAMSQKFRAAFRKLCLCGGKGSEKPTGGTYSVALTYSVVKDTSMVE
TMDQFNTELDEIMVTCELPDKKMAFQDTCVHDKVTLCND
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgttactgaagctcaagaaaatcagacttgggggacttggacggaccaaata
atcgaatacaaagtagtgagcactttgttagttttcgtgatatgcgcctttgggatcgtt
ggtaatgttatggtgatcttagtggtgcttaccactaaacacatgaggacacccaccaac
tgctacctggtgagcttggccgttgcagatctcatcgtactaactgcggcgggcttaccg
aatatcaccgacagcatcttcgggtcttgggtgttcggccgatcaggatgtctgggaatc
acctacctccagtacctgggaatcaatgcatcgtcctgctctatcaccgcctttaccatc
gaaaggtacatcgctatttgccacccgataaaagcccagttgctgtgcacactgtccaga
gccaagaagataatattgtttgtctgggttttcactttactttactccgtcatgtggttc
tacctgtcagatatcaaagaagaatcatatgagaacggcgtgaccatcgtgacatgcagc
tacaaagtttcaagacaactctatgtgcccatttactttttggatttcgggatatttttt
gttgtgccgcttatgctgtcaaccattctgtatggtctcatcgccagaatcctgatcatg
aatccgttaccttctgaacgcaaggataaaagtaaaaatgaacaaagcaacacaacgagt
ggatgtaaaaactcccaccacaccagcactaccgctacttctcggagacaggtgaccaag
atgctggctgtggtggtgatcctgttcgctgtgctgtggatgccataccgcaccctggtg
gtggtaaactccttcctggagcaggcctacatgaatacctggtttatcctcttctgtcgg
agctgtgtctacatcaacagcgcaatcaaccccatcatctacaatgctatgtcgcagaaa
ttccgtgccgccttccgcaagctctgcctctgcggagggaaaggctctgagaagcctacc
ggcggcacgtacagcgtggcgctgacttacagcgtggtcaaggacacatctatggtggag
actatggaccaattcaacacagagctggacgagatcatggtaacctgtgagttgcctgac
aagaagatggcgtttcaggacacctgtgtgcacgacaaggtgactttatgcaatgactga
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