Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372578
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Entry
139372578 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: sal-like protein 3b
KO
K19871
sal-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139372578
03036 Chromosome and associated proteins [BR:
ocla03036
]
139372578
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139372578
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139372578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-Di19
Zf-C2H2_ZNF451
zf-C2H2_2
B129_C2H2-zf
zf-C2H2_15
zf-H2C2_5
UBZ_FAAP20
Zf-C2H2_ZNF451_C
Roughex
Motif
Other DBs
NCBI-GeneID:
139372578
NCBI-ProteinID:
XP_070968424
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All DBs
Position
18:complement(33607486..33618952)
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AA seq
1285 aa
AA seq
DB search
MSRRKQAKPLHLKLDEEALQTDVATEHALLEGMDEEERRSCIEETHVCRNIAEYFTWAEL
YEHQRSCTEDLPQVLIVKEDERIPEPEGSPAGSSPTLSLAILSLAHRDSADMESADGGLE
LVEPMNYNDNDSTDMLEEMNMGEKEDESMEVEQQHHDKYKSSSPQSPPDITELAIPSAQS
SSVSSSMPSTNVTLEILHGTRVAVAQFSQSLHSSGAGGKAATAAIPVILEHLLALQQQQV
HQLQLIEQIRSQVAFMNRQPTQTALNPVSRAISLAPNPFPSQGLIAPPVLPLSGTIPSAV
NGQASVSSASVLERSHTLSKQTLYGQAHMRDARCTSAPSDNSAPPPTSCNNISSLHPPCM
GSYSHTSSSCTQTLTSSSPLSMQDQSNSLLSSPSSLPFLPQSPPSSVIFPNPLASIAATT
NALDPLSALMKHHRNGKLPSVSMFDTKPSPEEPFFKHKCRFCAKVFGSDSALQIHLRSHT
GERPFKCNLCGNRFSTKGNLKVHFQRHKEKYPRVQMNPYPVPEYLDNVPTSSGIPYGMSF
PPEKTGATWLDSKPVSATVPTSMGIQLPFTLTTMGSSSGSLSVTPPIKSPFRPSPALSEC
VSLSLNTTGSETSVPTALESPQSNQEGESSHVLKAEEIHLSQNWMTRPRVSPLTVATSKA
MTITTSTPEPSALTSNFSPLSLASDPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKIR
DPNQCILCHRVLSCQSALKMHYRIHTGERPFKCKVCGRAFTTKGNLNTHIGVHRANPPLR
VQHSCPICQKKFTNAVVLQQHIRMHMGGQISNSPLMDCLQDLNNDLSFHEKNVDSLNNYD
NDLMYDNSMGEEEDDDEEEEEVENMEGGLDTLNPLSSVSSSSPNSDAVVFSIAALENQMK
MIDSTMNLNHSFGLKSMMNGFMDSERRAAIHSSIVGEGQNHNAAGSPTVSESSTCIHVPV
SPAQSNSEVHLCNSPSGKHSGESQEITASVKSEQFDSPTSTPVLENGVTLDLRGLQPNRQ
CVKQESPYSTLFLSKERGSSQSIPSLITSIAPRMIKSEMNGHHRPMNFNEGLHHPFGLQV
PAAPPSLVSPGITSLLGPPQLRRTPKQHNCHACGKNFSSASALQIHERTHTGEKPFGCSI
CGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPLALLGGEAAMKFGEMFQKDLTERA
MNVDPGFWNRYASAITNGLAMKKNEISVIQNGGILQLYPMTAGMDRVSTGGSPPMTSLGK
TAMDLGINRPDFSMLIGDSKEIEIN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaagcaagcgaagccactacatctcaaattggacgaagaagcgttgcaa
accgacgtcgccacagaacatgctctattggagggaatggatgaggaggagcgccgcagt
tgcattgaggaaacccatgtgtgtagaaacattgctgagtacttcacctgggccgaattg
tatgagcaccagagaagctgcacagaggaccttcctcaggtcctcattgtgaaggaagat
gagaggatccctgaacctgaggggtccccagctggatcctctccaaccctcagcctggcc
attcttagcctggcccacagggactcagcagacatggagtcagcggacgggggccttgaa
ctggtggagcctatgaattataatgataatgacagcacagatatgttagaggagatgaac
atgggtgagaaggaggatgaatccatggaggtggagcagcagcaccacgacaaatataag
tcatctagcccccagagtcccccagatataactgagttggctatcccttcagctcagtcg
tcctctgtgagtagcagcatgcccagtacgaacgtaacgctggagatcctccacggtacc
cgggtggctgttgcccagttctcccagagcctccacagtagtggggcaggagggaaggcg
gccacagcggcaatcccagtgatcctagagcacctgctggctttgcagcagcaacaggtc
caccagttgcagcttattgagcagatccgtagccaggtggccttcatgaacagacagccc
acacaaacagcactaaacccagtctccagggcaatatcactggcaccaaaccctttcccc
tcccaaggcctcattgctccccctgtcctaccactgtctgggaccataccctctgctgtt
aatggacaagcgtctgtgtcttcggcatctgtgcttgaaaggtcccacacactctccaaa
caaactttatatggacaggcccacatgagagacgctagatgtacctcagctccctctgac
aactctgcccctccccctactagctgcaacaatatttcctcattacatcctccctgcatg
ggttcatactcacacacaagcagtagctgtactcagaccctgacctcgtccagcccactc
tccatgcaggaccagagcaacagtctcctcagctcaccatccagcctgccgtttctacct
cagagcccccccagcagtgtcatcttccccaaccccctggccagcatcgcagccacgact
aatgccctcgaccccctctccgccctgatgaagcaccaccggaatggcaagctgcccagt
gtgtccatgttcgacaccaagcccagccccgaggagccctttttcaagcataagtgcagg
ttctgcgccaaagtgtttggcagcgacagcgcgctgcagatccacctgcgctctcacacc
ggggagaggcccttcaagtgcaacctctgcggcaatcgcttctccactaaagggaacctg
aaagtccacttccagagacacaaagaaaagtatccccgtgttcagatgaacccttatcca
gtgccggaatatttagacaatgtgccaacgagctctggcattccctatggcatgtcattc
cctcctgaaaaaacaggagcaacttggctggatagcaagcctgtttcagcgacggtaccc
acctctatgggcattcagcttcccttcactctcactactatgggaagctcaagtggatct
ctaagtgtcacaccacccatcaaatctccttttaggccttccccagccttaagtgaatgt
gtgtctttgtcgctgaacactacaggcagtgaaactagtgttcccacagctttagagtct
ccacagtctaatcaggagggggaatcctcccatgtcttgaaagcagaggaaattcatctg
tcccagaactggatgactagacccagggtgagtccacttactgtggcaacaagtaaagcc
atgactattaccacatccacacctgagcccagtgctctgacttccaacttttcaccactt
tccctggcctctgacccgttcaaagcaaagtttccattcggtggcctcctggactctatg
caaacgtcagagacctcaaagctccagcagctggtggagaacatagacaagaagataaga
gaccccaaccagtgtatcctctgtcaccgcgtgctcagctgccaaagcgcgctgaagatg
cactaccgtatccacactggggagaggccctttaaatgtaaggtgtgtggcagggctttc
accaccaaaggaaatctgaatacacacattggtgtccacagagcaaaccctcctctccgg
gttcaacattcatgccccatctgccagaagaagttcaccaacgctgtagttctacagcag
cacatccgcatgcatatggggggtcagatctcaaactcacccttaatggactgcctacag
gacctcaacaatgatctctccttccacgagaagaacgttgacagcctaaataactatgac
aatgacctcatgtatgacaactccatgggggaggaagaggatgatgatgaagaagaagaa
gaggtagaaaatatggaggggggtcttgatacccttaatcccctgagctctgtctccagt
tcttctcccaactctgatgctgttgtcttcagcatagctgcactggagaaccaaatgaaa
atgatagactccaccatgaacctaaaccactcctttgggctaaagtcaatgatgaatggt
tttatggacagtgagcgccgtgctgctatccactcctctatagtgggagaaggacagaat
cacaatgcagccggcagcccaactgtgtctgaatcgtccacctgtattcatgtaccagtg
tcacctgcgcaaagcaattctgaggtccacctctgcaattccccatctgggaagcacagt
ggagagtcccaagagatcacagcctcagtgaagagtgagcaatttgattcgcccacctca
actccggtactggaaaatggagtgactttggatctgagagggttgcaacctaacaggcag
tgtgtgaaacaggagagtccttacagtacgctgttcctgagtaaagaacgtggttccagc
caaagcattcctagcctgattaccagcattgcgccaaggatgatcaaatctgaaatgaat
gggcaccatcgaccaatgaacttcaacgaggggctgcatcatccatttggcctccaggtc
cctgctgctcctccatctctggtcagcccaggaatcacctctctgcttgggccacctcaa
cttcgacggaccccgaagcaacacaactgccatgcgtgtggaaagaacttctcctcagcc
agtgctctacagatccatgagcggacccacacaggggagaaacctttcggttgctccatc
tgtggcagggcattcacaactaaaggaaacctgaaggtacacatgggcactcatatgtgg
aacaacgcaccagccagaagaggcaggcgtctgtcggtggagaaccccttggccttgctg
ggtggggaagctgccatgaagttcggagagatgtttcagaaggacctgacggaacgggcc
atgaacgtggatccagggttctggaaccgctacgcatcagctataaccaacggcctagcc
atgaagaagaatgagatctcagtgatccagaatgggggtattctacagctttatcccatg
acggcaggcatggacagagtcagcactgggggtagcccaccaatgaccagtcttggaaag
acagccatggaccttggaattaaccgacccgacttttctatgttaattggtgacagtaaa
gagattgagatcaattaa
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