Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372641
Help
Entry
139372641 CDS
T10872
Name
(RefSeq) semaphorin-3ab-like isoform X1
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
Ig_6
V-set
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
139372641
NCBI-ProteinID:
XP_070968520
LinkDB
All DBs
Position
2:67714102..67844546
Genome browser
AA seq
803 aa
AA seq
DB search
MASFWGMVVLLCGMVVISGAQKTKSNMPRLKLSYKEMLESNNLVTFEGLANSSAYHTFLL
DEEKGRLVVGAKDHIFSFNLLNISRDLAQIPWPASTSRRDECKWAGKDLMRECANFIKVL
QPFNQTHLYVCGTGAFHPVCAYLEVGKKLEVYQPDSVFRLEPLIENGRGKSPYDPKLLTA
SMLIDGELYSGTSADFMGRDFAIFRTLGQHHPIRTEQHDSRWLNDPRFVSVHLIPESDNP
EDDKIYLFFRENAMDGEHAGKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGL
NGIDTHFDELQDVFLMSAKDPKNPTIYAVFTTSSNIFKGSAVCLYSMADIRRVFLGPYAH
RDGPNYQWVPFPGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARGHPAMFNPIYPINN
RPIIVKTDTDYQFTQIVVDKVEAEDGQYDVMFIGTDMGKVLKVVSIPRGSWHDLEEVLLE
EMTVFREPTAITAMELSTKQQQLYLGSELGISQMPLHRCEVYGKACAECCLARDPYCAWD
GTECSRYFPMAKRRTRRQDIRNGDPLTQCSDLQHHDNLNVQPTVLDKTVYAVENSSTFLE
CSPKSQRALTYWQYQQVNDDRRQDVKAEDRFVRTEQGLLIRILNKKDSGTYVCQAVEHGF
MQTLLRVTLEVIDTERLDVLIHRDDETATHTAATHTTSWDTPPARESSNQKLWYRDFLSL
VNHPTMNSVDEFCEQVWKREKKQRRQKAHLSQQVQLHQQQQGLVHAHTHVNAHGLAAKWK
HLQERQKGRNRRTHELERAPRSV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcctctttctggggcatggtggtgttgctgtgtgggatggtggttatttctggagca
cagaagacgaagagcaatatgcccaggctaaaactctcttataaagagatgttggagtcc
aataacttggtgacatttgagggcctggccaatagctcagcttaccacacgttcctattg
gatgaggagaagggtcgtctggtggtgggagccaaggaccacatattctccttcaacctg
ctcaacatcagcagagacctggcacagatcccgtggcctgcatccacctccagaagagat
gagtgtaaatgggcagggaaggacctcatgagggaatgcgctaacttcatcaaggtgttg
cagccttttaaccagacccatctgtatgtatgtggaaccggagccttccaccctgtctgc
gcctacttggaggtggggaagaaactagaggtataccaaccagacagtgtgttcaggctg
gagcccctgatagagaacggtcgagggaagagcccttatgaccccaagctgctcacagcg
tccatgctcatcgatggcgagctgtattctgggacgtcagcggacttcatggggcgggat
tttgccatcttccgtacgttgggacagcatcaccccattagaactgagcaacatgactcc
cgctggctgaatgatcccaggtttgtgagtgtccatctgatcccagagagtgacaacccc
gaggacgacaagatctatctgttcttcagagagaacgctatggatggggaacacgcaggg
aaggctacacacgcacgcatcggacagctctgcaagaatgactttggaggccacaggagt
ttggtgaataagtggactactttcctgaaggccagactggtgtgttctgtacctggactc
aatggcatagacacacactttgacgaactacaggatgtgtttctgatgagcgctaaggat
cccaagaaccccaccatctatgcagtgttcactacatccagtaacatcttcaagggctca
gcagtgtgtttgtacagcatggcagacatcagaagggtgtttctaggtccctatgcccac
agggacggccctaactatcagtgggttcccttccccggaagggtaccgtacccacgacct
ggcacgtgccccagcaagacattcggaggatttgattcaacaaaggacttgcctgatgat
gtcataacatttgcgagaggacacccagcgatgtttaaccccatctatcccatcaacaac
cgaccaatcatagtcaagacggacacggactaccagttcacacagatagtggtggacaaa
gtggaggctgaggacggacagtatgacgtcatgttcataggcacagacatgggtaaagtg
ctgaaggtggtgtccatccccagagggtcctggcatgacctggaagaagttctactggag
gagatgactgtgttcagggagccaactgctattacagcaatggaactctccacgaagcag
caacagttgtacctaggctcagagctgggcatatcccagatgcctttgcatcgctgtgag
gtgtacgggaaggcgtgtgctgagtgctgtctagctagagacccttactgtgcctgggat
gggaccgagtgctcacgatactttcccatggccaagaggaggacaaggagacaggacatc
aggaatggagaccctttaacccagtgttcagacctgcagcatcatgataacctgaatgtg
cagcccacggtgctggataagacagtgtatgcagtggagaacagcagtacgttcctggag
tgtagccccaagtcccagagagcactcacctactggcagtaccaacaagtcaacgacgac
aggagacaagacgtcaaagcagaggatcgttttgtccgtacggagcagggcctgctgatc
cgcatattgaacaaaaaggattctgggacttatgtgtgccaggctgtagaacacggcttc
atgcagacgctcctaagggtcaccctggaagtcatcgacactgaacgcctcgacgtgctc
attcaccgtgatgacgaaactgccacacacaccgctgccacacacaccacctcctgggac
acgcccccagcccgggaatcgtccaatcagaagctatggtaccgtgacttcctgtcatta
gtgaaccacccgaccatgaacagcgtggatgagttctgtgagcaggtgtggaagagggaa
aagaagcagaggaggcagaaagcacacttatcccaacaggtccagctacaccagcagcag
cagggcctcgtgcacgctcacacccacgtgaacgcccatgggcttgcggccaagtggaaa
cacctgcaggagaggcagaagggccgcaaccgtcggacccatgaactggagagagccccc
cgcagcgtctga
DBGET
integrated database retrieval system
