Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372759
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Entry
139372759 CDS
T10872
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
139372759
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Gene cluster
GFIT
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NCBI-GeneID:
139372759
NCBI-ProteinID:
XP_070968661
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Position
18:63385712..63401124
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AA seq
697 aa
AA seq
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MKIGAISMLSPVKDVLPWKEFSHIARLSPTEPHDTVGWLSTLPALHSHHPPCPICERMHP
SGTHCSAPEESGKTSTEPGEAQLDFYLKLGYSPAQVWTVLQKFGLNTDTNRVLGELVRTG
ASLEGIEEEQEKEGAPSILVGRGETLSNLPLTPPPSRGDVPSEEGDALRPIVIDGSNVAM
SHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLITDQHILRELERKKI
VVFTPSRRVAGKRVVCYDDRFIVKLAHETAGIIVSNDTYRDLQGERQDWKRFIEERLLMY
SFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGMKCKFYHPERANQS
RCSLADELRKKAKLSLSEQKHPTAGAGPAYGLSLEEGTAQKLPLEQRNGSLKKGHISENV
LLIKGSHLSSQRSPTKKDKTNRHLTNLDLAMPSGSQSPTDLDSALPSGSQERLDSGLGSF
ESQVSDPSRDHCDRYGNAGFRNCLSPPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSTGYQ
QHRSRGPASTHNNTHSPHHSMGPASTYHPGKITYSPTYYLSYGAPIYPVGEHQYRYPNDF
QQENRAQPPQQTYWSDPFGTYPQTLHSTAQMEKQRHWLLPQTQPHPHGESREREEVRKKL
LAIFNGRLVDKVMDMFPQLMDPQRLAAEILILQSPGL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggtgctatctcaatgctgagcccggtcaaagatgtcttaccatggaaagag
ttctcccacatagcccgtctgagccccacagagccccacgacacagtcggatggctgtcc
actctgcctgcccttcacagtcatcatccaccctgtcccatctgtgagagaatgcaccct
agtggtacccactgctctgccccggaggagagcggcaagacctccacagaacctggagag
gctcagctggacttctaccttaaactgggctactccccagcgcaggtctggaccgtgttg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccagtctagaagggattgaggaggagcaggagaaggagggagccccgtctatcctggtg
ggccgaggggagaccctcagtaacctgcccctcacccctccacccagccggggcgatgta
cccagtgaggagggtgatgccctgagacccatagtgatcgatgggagcaacgtggctatg
agccacgggaacaaggaaatgttttcctgcctgggaatccagctggcggtaaacttcttc
ctggacagaggtcatacggacatcactgtgtttgttccctcttggaggaaggagcagcct
agaccagatgtcctcatcacagatcaacacattttgcgtgagctggagaggaagaagatc
gtggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctatgacgatcgc
ttcatcgtcaagctggcgcatgagaccgccggcatcatcgtgtccaacgacacctaccgt
gaccttcagggcgagagacaggactggaagcgcttcattgaggagaggctactcatgtac
tccttcgtcaatgacaagttcatgccccctgatgaccctctgggtcgtcatggtcccacc
ctggagaactttctacggaaggttcctcgtttgccacggaaacagccgtgcccttatggc
aggaaatgcacttatgggatgaagtgtaaattctaccacccggaacgagccaaccaatcc
cgttgctctctggctgacgagctgcggaagaaggccaagctatctttatcagaacaaaaa
caccccactgcaggtgctggacctgcctatggcctttctctggaggaggggacggctcag
aaactgcctctagaacagaggaatggctccctgaagaaaggccacatcagtgagaatgtg
cttctgatcaagggaagccatctgtccagccagaggtccccaactaagaaggacaagacc
aaccgacacttgaccaatctggacttggccatgcccagtggctctcaatccccgacagac
ctggactcggccctgcccagtggctctcaggagcgactagattctggtcttggctccttc
gagagccaggtgtctgacccctccagggaccactgtgaccgttatgggaatgctgggttt
aggaactgcctgtccccccctagtatgagacaacaaatctattccctgcctagcaacctg
ccttctagctgcagctctcatcctcctcagcctttactgggccccagcacaggataccaa
caacatcgcagcaggggcccagccagcacccacaacaacacccacagcccacatcacagc
atgggcccagccagcacctaccacccaggcaagataacctacagccccacctattacctc
agctatggggcaccgatatatccagttggggagcatcagtacaggtatcccaatgacttc
caacaggagaacagggcccaacctccacagcagacctactggtccgatccgttcgggact
tatcctcagactctccatagcactgctcaaatggagaagcagagacactggctcctccct
cagacacagccccacccccacggggagagcagggagagagaggaggtcaggaagaagctg
ctggctatctttaacggccgtctggtggacaaggtcatggacatgtttccccagctcatg
gacccacagagattggctgctgagatcctcatcctgcagtctccgggcctgtga
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