KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372929
Entry
139372929         CDS       T10872                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139372929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139372929
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139372929
 Complex B
    139372929
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 139372929
NCBI-ProteinID: XP_070968904
LinkDB
Position
18:complement(6117493..6128607)
AA seq 246 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGIRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRDLYGRRRKGKGGGGGGGGHRSRSRSRERRSRSRDRGRGGDGGRGGGRDREKRRSRDR
ERSGRF
NT seq 741 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccattttcggaacagagaaagacaaggtcaattgttcattc
tactttaaaattggagcgtgcagacatggggaccgctgctctaggttgcacaacaagcca
actttcagccagaccattgccctgttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtatacgctgtgccgtcagcgatgtggaaatgcaagagcactatgacgag
ttctttgaggaagtcttcacagagatggaggagaagtacggagaggtggaggagatgaac
gtgtgtgacaaccttggcgaccacctggtcggcaacgtctatgtgaagttccgtcgggaa
gaggatgcagagaaagcggtgatggacctgaacaaccgctggttcaacggtcagcctgtc
cactcagagctctcccccgtcactgacttcagggaagcctgctgtcggcagtatgagatg
ggagagtgcaccagaggaggcttctgcaacttcatgcacctgaaacccatctccagggaa
ctccgccgggacctgtatggacgccgcagaaaaggcaaaggaggaggaggaggaggagga
ggacaccgctctcgctcgcgatcccgggaaaggcgttctcgctcccgagaccgtggccgt
ggtggcgatggtggaagaggtggcggacgagaccgcgagaaacggaggtccagggaccgg
gaacgttctggaaggttttaa

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