Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372930
Help
Entry
139372930 CDS
T10872
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Cadherin related
139372930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139372930
NCBI-ProteinID:
XP_070968909
LinkDB
All DBs
Position
2:69203120..69246931
Genome browser
AA seq
1048 aa
AA seq
DB search
MQQQRSCLWRWRVLLWSTLLLLIPLSATGHLFAIVEDGVSLEDGSGDPGLDQTVRGENWN
PCLEGHDVFSKVKENSMIGELIAELNTELTANDVVWSLTGEDADWFFLERRSIRLNAPLD
RVLDREVQGPVLMAALTCYEEDTVQSEYRIMVEILNENDNTPEFVESTIQPRSISELAEV
KTVVFTVQATDADGDTIMYSIDQTSPDAAYFRVDLPNSGEVILAKPLDYETKTQLKITIY
ASEMNTVEKFNTSAILTVNILDGDDQYPQFLPCMPPSNDQSNRVCSNPVYTVNITEGEQD
VLLDFSPGPINAVDGDRGLSSPLSYSILSGADNGRFVMDEVTGEVRLMKEVENRLLTPTL
RLRVMAYQRNDPRKYSVATVVIRVVAVNRFSPQFGRAEYRGFVTEGNSPASLVNTYGNTV
LLLQIQDRDFSDGINPKMHYSLRSSSNHTEFYHITQEGLLIARTNQLRPSQKHSLKVVAV
DLESGDMATALIKVEVLYEGQIVPQGPLGDGRLHGSCAVGKAMGVVILGLTLLGCALYAL
QHVLRTYRGLKDPEDRGCIAQGKHPNVRLQWFQLVSHSSPMPVLDEVKFKKEGLSTSTST
SKLLGGQSIYTPADSDPSPFNALPIATPSTTYIQPILANSTHTPSTTITPELLKTSTQHL
GNSSSSTPPHPSPTPTMDQTDSPLATHPSPVADPIGTHTQIEETPTSPNHQQVHTPLPPP
TPINSPPHPTPPPTSPTTPLPFSPTPGPIYNPECTGYNHTPLLTPPCPEQDRVGTPPPKP
TPGQTHTPVLTITCPEQVGQPGYPEERRPSTHSPETASIGDDDCFLGDEEATRNSDDDED
EELLAGTGVLAIGLWLRFDPKTRGLFEGAESPHVFFTGVYILIIAGSLMMVVGFLGCCGA
IQESPCMLGLFFFFLLIIFAIEVAAGIWGFSNQSKVVDDITQFYLETYQNYKNTSQDTLR
ETLRLIQTGLDCCGPTGSFGDFAKDTCPPRDGLDSLITKSCPDAIDEVFDSKLHIIGGVG
IAIGVIMVFGMIFSMLLCCAIRKSREIV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagaggtcttgtctgtggaggtggagggtcctactctggtccacactactc
ctcctcattcccctcagtgccacagggcatctctttgccattgtagaagatggcgtgtct
ttggaggatgggagtggtgaccctggtttagaccaaactgtgagaggagaaaattggaac
ccatgtctggagggccatgatgtgttttccaaggtcaaagagaacagcatgataggagaa
ctcatcgctgagctcaacactgagctgacagccaatgatgttgtctggagcttaactggg
gaggacgctgattggttcttcctagaaaggcgcagcatcagactcaatgccccattggat
agagttctggaccgggaggtgcagggcccagtcctgatggcagcgttgacctgctatgag
gaggacactgtgcagagtgagtacaggatcatggtggagattctgaatgagaatgataac
actcctgagtttgtggagagcaccatacagcctcgcagcatcagtgagctggctgaggtg
aagacagtggtgtttacagtccaggccacagatgcagatggcgacaccataatgtactcc
atcgaccagacctcgcctgatgctgcctacttcagagtggatctccctaacagtggagag
gtgatactggccaagcctctggactacgagactaaaacacaactgaagatcaccatatat
gcttcggagatgaacactgtggagaagttcaacactagtgccatcctgaccgtgaatatc
ttggacggagatgaccagtacccacaattcctgccgtgcatgcccccctctaatgaccaa
tcgaatcgtgtctgcagcaaccctgtctacacggttaacatcacagaaggcgaacaggac
gttcttctggacttctctcctgggccgatcaatgctgtggatggagacagaggcctcagc
tcacctctcagctatagcattctgtcaggggctgataatgggcgttttgtgatggatgag
gtgacaggggaggtgcgtctgatgaaagaagtagagaacagactactgacacccacacta
cgcctacgggtcatggcgtaccagaggaatgaccctaggaagtactcagttgccacagtg
gtgatccgtgttgtggctgtcaaccgcttttctccccagtttggtcgggccgaataccgt
ggttttgtcactgaaggcaacagccctgcctcactggtcaacacttacggaaacaccgtg
ctgctgctacagatacaggacagggacttctctgatgggattaatcccaagatgcactac
tccctgaggtcctcgtccaatcacacagagttttaccacatcacacaggaggggcttctg
atcgccaggaccaatcagctacggccatcacagaaacacagtctgaaggtagtggctgtg
gatctggagtcaggtgacatggccactgctctcataaaggtggaggtgctgtatgaagga
caaatagtccctcagggcccattgggggacgggcgtctccatggtagctgtgcagtaggc
aaggctatgggtgtggtcatcctggggctgactctgttaggctgcgctctgtatgcactg
cagcatgtcctccggacatacagaggactgaaggacccagaggacaggggctgtattgca
cagggaaaacaccccaatgtgagattacaatggttccaactggtgagtcacagtagcccc
atgccagtccttgatgaggtgaagttcaaaaaggagggtctaagcacctccacctccacc
tccaagctcctgggcggtcagagcatttacacacctgcagactcggacccttctccattc
aacgctttacccatagctacaccctcaacaacctacatccagcctatactagccaactcc
acccatacacctagtacaaccatcacacctgaactactcaagacatccactcaacacctg
ggcaactccagctctagtacacccccacacccatcacctacacctaccatggatcagaca
gactcgcctttagctacacacccctcccctgttgcagatccaataggtacacacactcag
atagaagagacacctacctcacctaaccatcagcaggtacacacacctttacctcctccc
actccgatcaactcaccccctcaccccacaccccctcctacctcacctaccacacctctc
cctttctcacctactccaggcccgatatacaatcctgaatgtacaggatataatcacaca
cctttacttactccaccctgtccagagcaggacagggtagggacacccccacctaaaccc
accccagggcaaacacatacccctgtactgaccatcacctgcccagagcaggtaggacaa
ccagggtaccctgaggagcgcagaccctccacccacagccctgagacagcctccatcggt
gatgatgactgcttcctgggggatgaagaggccaccaggaacagtgatgatgatgaggat
gaagagctgcttgcaggtacaggagtgctggctatagggttgtggttgaggtttgaccca
aagaccagagggctgtttgaaggagcagaatctccccatgtcttcttcacaggtgtatat
atcctcataattgcagggtcattaatgatggttgttgggttcctgggatgctgtggagcg
attcaggagtcaccgtgtatgctggggctgttcttcttcttcctcctcatcatattcgcc
atcgaggtcgccgcgggaatctgggggttctccaaccaaagcaaggtggttgatgacatc
actcagttctacttggagacatatcagaactacaagaacacttcacaggacacactgaga
gagacactccgtctcatacagactgggttggactgctgcggaccaacaggttcctttggg
gactttgccaaagacacctgtcccccaagagatgggctggacagcctcatcaccaagagc
tgtcctgacgctatagatgaagtgtttgactccaagctgcacatcataggaggagtgggc
atcgctattggagtcatcatggtgtttgggatgatcttcagcatgctgctctgctgtgcc
attaggaagtcacgggagatcgtctga
DBGET
integrated database retrieval system
