Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372932
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Entry
139372932 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139372932
09143 Cell growth and death
04210 Apoptosis
139372932
09144 Cellular community - eukaryotes
04530 Tight junction
139372932
04540 Gap junction
139372932
09142 Cell motility
04814 Motor proteins
139372932
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139372932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139372932
03036 Chromosome and associated proteins [BR:
ocla03036
]
139372932
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139372932
04147 Exosome [BR:
ocla04147
]
139372932
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139372932
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139372932
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139372932
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139372932
Exosomal proteins of other body fluids (saliva and urine)
139372932
Exosomal proteins of colorectal cancer cells
139372932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139372932
NCBI-ProteinID:
XP_070968907
LinkDB
All DBs
Position
18:complement(6727781..6731311)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGDEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcatgtcggccaggccggagcccagatgggcaatgcatgc
tgggaattgtactgcctggaacatgggatccagcctgatggacagatgcccagtgacaag
acaatcggagggggagatgactccttcaataccttcttcagtgagactggggctggtaaa
cacgttcctcgtgcagtctttgtagacctggagccaaccgtcatcgatgaggtccgcaca
ggtacctaccgccagctgttccaccctgagcagctgatcacaggcaaggaggacgctgcc
aacaactatgcccgtggtcactacaccattggcaaggagatcatcgacctggtactcgat
aggactcgcaaactggctgaccagtgcactgggctccagggcttcctgatcttccacagc
tttggaggaggcaccggctctgggttcacctccctgctgatggaacgtctctctgtcgac
tatgggaagaagtccaagcttgaatttgctgtttaccctgctccccaagtttctactgct
gtggtggaaccttataactccatcctgaccacccacaccaccctggagcactcggactgt
gccttcatggtggacaatgaggccatctatgatatctgccgcaggaacctggacattgag
cgccccacctacaccaacctcaacaggctgattggtcagatcgtctcctccatcaccgcc
tccctgcgctttgatggggccctcaatgtggacctgacagagttccagaccaacttggtg
ccttacccccgtatccacttccctctggccacctatgctccagtcatctctgctgagaag
gcctaccatgagcagctgtctgttgctgacatcaccaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctctaccgt
ggtgacgttgtgcccaaagatgtcaactctgccatcgccaccatcaagaccaagcgcacc
atccagtttgtagactggtgtcccactggcttcaaggtcggtatcaactaccaaccaccc
acagtggtccctggaggagatctggccaaggtccagagagctgtgtgtatgctgagcaac
accaccgccatcgctgaggcctgggccaggcttgaccacaagtttgacctgatgtacgcc
aagagagcctttgtgcactggtatgtgggagagggcatggaggagggagagttctcagag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggtactgacagtgta
ggggacgaggatgaagaaggagaggagtactaa
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