Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372933
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Entry
139372933 CDS
T10872
Name
(RefSeq) tubulin alpha-1A chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139372933
09143 Cell growth and death
04210 Apoptosis
139372933
09144 Cellular community - eukaryotes
04530 Tight junction
139372933
04540 Gap junction
139372933
09142 Cell motility
04814 Motor proteins
139372933
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139372933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139372933
03036 Chromosome and associated proteins [BR:
ocla03036
]
139372933
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139372933
04147 Exosome [BR:
ocla04147
]
139372933
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139372933
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139372933
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139372933
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139372933
Exosomal proteins of other body fluids (saliva and urine)
139372933
Exosomal proteins of colorectal cancer cells
139372933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139372933
NCBI-ProteinID:
XP_070968912
LinkDB
All DBs
Position
18:complement(6734965..6737923)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGDEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctgtccacgtcggccaggcaggtgtccagatgggcaatgcatgc
tgggaactgtactgcctggaacatgggatccagcctgatggacagatgcccagtgataag
acaatcggagggggagatgactccttcaacaccttcttcagtgagactggggctggtaaa
cacgttcctcgtgcagtctttgtagacctggagccaaccgtcatcgatgaggtccgcaca
ggtacctaccgccagctgttccaccctgagcagctgatcacaggcaaggaggacgctgcc
aacaactatgcccgtggtcactacaccattggcaaggagatcattgacctggtactcgac
cggacgcgcaaactggctgaccagtgcactggtctccagggcttcctgatcttccacagc
tttggaggaggcaccggctctgggttcacctccctgctgatggaacgtctctctgtcgac
tatgggaagaagtccaagcttgagtttgccatctatccagctccccaggtgtccactgct
gtggtggagccttataactccatcctgaccacccacaccaccctggagcactcggactgt
gccttcatggtggacaatgaggccatctatgatatctgccgcaggaatctggacattgag
cgccccacctacaccaacctcaacaggctgattggtcagatcgtctcctccatcaccgcc
tccctgcgtttcgatggagctctcaatgtggacctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgctccagtcatctctgctgagaag
gcctatcacgagatgctatcagtggctgagatcaccaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctctaccgt
ggtgacgttgtgcccaaagatgtcaactctgccatcgccaccatcaagaccaagcgcacc
atccagtttgtagactggtgtcccactggcttcaaggtcggtatcaactaccagccaccc
acagtggtccctggaggagatctggccaaggtccagagagctgtgtgtatgctgagcaac
accaccgccatcgctgaggcctgggccaggcttgaccacaagtttgacctgatgtacgcc
aagagagcctttgtgcactggtatgtgggagagggcatggaggagggagagttctcagag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggtactgacagtgta
ggggacgagggggaggaggagggagaggaatattaa
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