Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139372953
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Entry
139372953 CDS
T10872
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139372953
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Others
139372953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4800
Beach
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_WDHD1_1st
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
GRAM
CT47
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
139372953
NCBI-ProteinID:
XP_070968947
LinkDB
All DBs
Position
18:complement(6457267..6488860)
Genome browser
AA seq
2371 aa
AA seq
DB search
MGIGSGERLTGLISSQVFQGRLDSLAVATIKALTTVMHKSPAAKEVFKERIGYTHLFEVL
VSLGQPSRHLLKELMNMAVEGEHSSVGILGISNVEPLLLLIQWLPEMDSAELQVFTADWL
RRLCCINRQTRATCVNAAMAVRLLATLGHHARLHRACAESLVSLLGSLGSQSLSGGELLQ
LLRLLRPLEPGQAHPYVGPVLRAVLGMVRKQGLESAMQYFDLSPSMAGIAVPMVMRWPGP
AFSFLAWLSLDQDQQGLPGKGDKRKQLYSFFTPGGTGLEAFISSAGVLVVAVCTKKEYMT
VMLPDYSFCDSLWHSIGVVHVPGKRPFGQSLVYIYVDGQQKLSAPLKYPTMTEPFTSCCI
GSAGHRTTTPPPSQIPDPPFSGAPPSARSSLGGILSTQGWGSLLGGKPESVTKLISAGTQ
DSEWGSPTSLQGQLGNVMVFHEALQPNHVKALCSLGPNCISPFKTQEAELGDLTTKLLLH
YSPKACRNPICLDLSPNLLHGRLTGNKVVNWDIKDMINCVGGLPVLFPILEQLTLLTPEN
HTAADPPGSEFISPTPDAATSPGDGDWVILPSNRSSEARLEKNLVATFLLVLKHFLQRHP
INQESLLHSHGVATLGGLMQKLPASLVDVSVLVSAQLLVEQVTYEKNQQLLQQLHTHLLF
NFSIWNLGDFPLRIGHIQYMSTVIKENRKQFRKKYGVQFLLDTIRLYYGKSVSREGDLSE
DDNQTIRLSLCGLLKYYISKGMTQEEMHSILGYIAAIGDEEQLCGVIELLLSLLQTSAAR
DQLFLLLFEPGAADSCYALLLNTKHSDRLRELVFKMFDRMLRCDRVYEKNKQRLKLREVG
YSGLSLLFSDLHVTPSLVKSLLNQVLHTDHVVSYKDLMALVQLTHRAGPSVRLLVCNRLY
QLLQSQQDAAREISRQLCWQETLMRLFLRSPCEGGPGRGDAASTCSLDLSRGSGSRLELP
LERRGRAGSAGRLVDEDRLSMSSRRSVDSLENGDVLSLLDTPVSQIGEGLLLKPWASGGG
KAGGLSLDLSHMSAYEGGESGNQTPGSMVSTPSPLEASAKAFPDASAASLTEDSFLFSDN
MSLGESFSCAERTEEELSRMLLEIVLCVMWRGVEGSDDAAWLERGQVFSALTKLGTTNEL
LLPVDHIKLSLMERMLEWAVTDNREATAAMLPQHTENAVRLLHVVQDFLQAEGLVNPTLW
TEKVLEETVTLMDSLMVWYSSGAQWLQLSQVGLRLLLGFMAQEDPQVCALATAKLNGILQ
TKSVETQDEACYLLGKVEGILRRSVGGQTEETYMCLVPLLRTLLSKVNKLLYMELHLPQL
PDTNGSPSFFEDFQLYCNSPEWRVYLDKYIIPYMKQYEIETFSQGHETMALFWKECYESF
MVNLHKRERERGESKIRFQEQFVEPFSRRGRQENLRYNSMLKQLHSQHSAVLRQWRGARR
SLVCERGPWADRQQSEMHWRVSSAENYSRMRLKLVPNYNYEDHRQASALRDNLGVQQQKV
TSESLLLEAVKQVKVSDLEDDILELPEDDPAATNNTGDVEEAGQKEKLVLWEDCELVTQV
DVSPGRLELTTQHIYFYDSSTEKEEGVGQDFKWPLSQIREIHLRRYNLRRSALEIFLIDQ
TNYFLNFKKEVRNKVYSRMLLLRSLSLYGTRSPQELLKASGLTQKWVNREMTNFDYLIQL
NTIAGRTYNDLSQYPVFPWILSDYTSEELDLTDPGVFRDLSKPVAVLNERNAKAVREKYE
SFEDPTGTIDRFHYGTHYSNAAGVMHYLIRVEPFTSLHIALQSGRFDCADRQFHSIPALW
QTLTDNPNDVKELIPEFFYFPEFLENQNAFDLGRLQISKERVNDVILPKWAKSPEDFIYK
HRKALESEYVSAHLQDWIDLIFGYKQRGPAAVEALNVFYYCTYEGAVDLDAITDEKERKA
VEGMISNFGQTPCQLLKEPHPVRLSLEEVEKRKGRLDASPLSIFEHLAELKSFFVEGIND
NVPLVKAVVPKNQSHSFITQGSPDTMVTLSQNCLMGTHGWLPYDKNISNYFTFIKDPTVA
NPKTQRVLGGPFSPGVEVTAGLFVVSHDGKLLFSGGHWDNSLRVTSLVKGKTVGHHIRHM
DIVTCLSTDYCGIHLISGSRDNTCMVWQVLQQGGCPVGLCPKPVQVLYGHTDEVLSVSIS
TELDMAVSGSRDGTVIIHTVRRGQYMRCLRPPCESSLPVSILHLAISYEGCVVVHTCVEG
KATLKDKNGLHLYSVNGKHLCTEGLKEQVTDMCVSGEYLVIGSEQGFLSIRDLYSLSLCA
TPMAMRVPVRCVSVTKEQSHVLVGLQDGKLIIVGVGKPAEVKSSFRNYIAQSLEGSPLMA
MPLLAPLRVRSPARRLSLRDKLMFNPQGPDP
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggggattggctcaggagaaagattgacaggtctgatatcgtctcaggtgtttcaaggg
cgactggactctctcgccgtggcaaccatcaaagccctgacgacggtgatgcacaagtca
cctgctgcaaaggaggtgttcaaggagcggattggctacactcacctgtttgaggttctg
gtctccctgggccagccctccagacacctgctgaaggaactgatgaatatggctgtggag
ggtgaacacagctcggtgggtatcctgggcatcagtaacgtggagcccctgctcctcctc
atccagtggctcccagagatggactctgctgagctgcaggtgttcactgccgactggctc
cgccgcctctgctgcatcaaccgacagacgcgcgccacctgcgtcaatgccgccatggcc
gtgcggctcctcgccacccttgggcaccacgctcgcctgcaccgggcgtgcgctgaaagc
cttgtcagtttgctagggtcgctggggagccagtcgctgagcggcggtgagctcctccag
ttactcaggcttctgaggccgctggagcccgggcaggctcacccgtacgtgggccctgtg
ttgagggcggtcctgggcatggtgcggaagcagggtctggagagcgccatgcagtacttt
gatctgtcgcccagcatggctggcatcgccgtgccgatggtgatgcgctggccgggccct
gccttcagcttcctggcctggctctcattggaccaggaccagcagggactgcccggcaag
ggggacaagaggaagcagctatacagttttttcaccccgggaggaacgggcttggaggcc
ttcatcagttcagcaggggtactggtggttgccgtgtgcaccaagaaggagtacatgaca
gtgatgctaccagactactctttctgtgactcactctggcacagtataggtgtagtccat
gtaccggggaagaggccatttggacagagtctagtttacatctatgtagatggacagcag
aaactgtcagcaccactcaagtacccaaccatgacagagcctttcacctcctgctgcatc
ggctcagcgggccatcggaccaccacaccacccccctcccaaatcccagacccccccttc
tccggggcgcccccttccgcccgctcctccctcgggggcatcctgtcgacccagggctgg
gggagcctcctggggggcaagcctgagtcggtcaccaaattgatctctgcggggacgcag
gacagcgagtggggcagccccacctccttgcagggccaactgggtaacgtcatggtgttc
cacgaagcactgcagcccaaccacgtcaaggccctctgcagcctcgggccaaactgcatt
tctcctttcaagacccaggaggcggagctcggtgacctcacaactaaacttctgctgcac
tactcccccaaggcttgtcggaaccccatctgtttggacctgtcccccaacctcctccat
gggcgtctgactgggaacaaggttgtcaactgggacatcaaggatatgatcaactgcgtg
ggaggtctacctgtcctcttccccatcctggagcaactcaccctgctgacccctgagaac
cacaccgctgccgaccccccggggtcagagttcatcagccccacccctgacgcggccacc
tcccctggggacggggactgggtcatcctgccctccaacaggtcctcggaggcacgtctg
gagaagaacctggttgccaccttcctgctggtgctgaagcacttcctgcagcgtcacccc
atcaaccaggagagcctgctgcactcccatggagtagccaccctggggggactgatgcag
aagctgcctgccagtctggtggatgtgagtgtcttggtgtctgctcagctcctggtggag
caggttacctacgaaaagaaccagcagctgctgcagcagctccacacacaccttctgttc
aacttcagcatctggaacctgggagacttccccctgcgcatcggtcacatccagtacatg
tccaccgtcatcaaagaaaacaggaagcagttccggaagaaatacggagttcaatttcta
ctggacaccattcgcctttactacggtaagagtgtcagcagggagggagatcttagtgaa
gacgacaatcagaccatccgattgtccctctgcggcctcctgaagtattacatcagcaag
ggtatgacccaggaggagatgcacagcattctgggatacatcgccgccatcggagacgag
gaacagctgtgtggagtgatagagttgctgctcagtctgctccagaccagtgctgccagg
gaccagcttttcctgcttctgtttgagccgggggcggccgactcctgctacgccctgctg
ctcaacaccaaacactcagaccgcctccgagagctcgtcttcaagatgtttgaccgcatg
ctgcgctgcgaccgtgtctatgagaagaacaagcagaggctgaagctgagggaggtggga
tactctggtctctccctgctcttctctgacctccacgtcaccccctccctcgtcaagagc
ctgctcaaccaggtgctccacacagatcatgtggtgagctacaaggaccttatggccctg
gtccagctgactcaccgggccgggcccagcgtacgcctgctcgtgtgcaataggctgtac
cagctcctccagtcccagcaggacgcggcgcgggagatctccagacagctgtgctggcag
gagaccctgatgaggctgttcctgcgctccccctgcgagggcggcccggggcggggcgac
gctgccagcacctgcagcctggacctcagccggggcagcggcagccgcctagaactgccc
ctggagaggaggggccgagcaggcagcgccgggagactggtggatgaagaccgcctcagc
atgagctccagaagatcagtggatagtcttgaaaatggggatgtgctttcgcttctggac
acgcccgttagtcagattggggagggcctgttgctcaagccctgggcgtctgggggaggg
aaagcaggggggttgagtttggacctgtcccacatgagtgcctacgagggcggggagagc
ggcaaccagacgccggggagcatggtcagcacgccatcgccgctggaggcgtcagccaag
gccttcccagatgcctcggcggcgtccctcaccgaggacagcttcctgttcagcgacaac
atgtcgttgggggagtcgttcagctgtgctgagcggacggaggaggagctgtctcgcatg
ctgctggagatcgtgctgtgcgtaatgtggcgaggcgtggagggctcggacgatgccgcc
tggctggagcgggggcaggtgttctctgccctcaccaagctgggcactaccaacgagctg
ctgctgcctgtggaccacatcaagctcagtctgatggagaggatgctggagtgggctgtg
actgacaaccgggaggccacggcggccatgttgccccagcacaccgagaacgctgtgcgg
ctgctccacgttgtgcaggacttcctgcaggcggagggcctggtcaaccccaccctgtgg
acagagaaggtcctggaggagacagtgactctgatggacagtctcatggtgtggtactcg
tcaggggcccagtggctgcagctgtctcaggtgggcctgaggcttctgctgggcttcatg
gcccaggaagacccccaggtgtgtgccttggccacagccaagctgaacggcatcctgcag
accaagagcgtggagactcaggacgaggcgtgttacctgctgggcaaggtggagggcatc
ctgagacgctctgtaggggggcagacagaggagacctatatgtgcctggtgcccctgctc
cgcacgctgctctccaaggtgaacaagctgctgtacatggagctgcacctcccccagctg
cctgacaccaacggcagcccctccttcttcgaggacttccagctctactgcaactccccc
gagtggagggtctacctcgacaaatacatcatcccctacatgaagcagtatgagattgag
acgtttagccagggtcacgagaccatggctctgttctggaaggagtgctatgaaagcttc
atggtcaacctgcacaaaagagagagggagaggggagagagcaagatacgcttccaggag
cagtttgtggagcccttctctcggcgcggccggcaggagaacctgcgatacaacagcatg
ctgaagcagcttcacagccagcacagcgccgtcctcaggcagtggagaggagcacgccgc
agcctggtgtgtgagagaggcccctgggcagacaggcagcagagtgagatgcactggcga
gtgtccagcgcggagaactactcccgcatgagactcaaactggtgcccaactacaactat
gaggaccaccggcaggccagcgctctcagggacaacctgggtgtccagcagcagaaggtg
acatctgagtccttactgctggaggcggtcaagcaggtgaaggtcagcgacctggaggac
gacattctggagctgcctgaagacgaccccgcagcgaccaacaacacgggggacgtggag
gaggcaggccagaaggagaagctggttctgtgggaggactgtgagctggtcacccaggtg
gatgtcagccctggacgtctggagctcaccacccagcacatctacttctatgacagcagc
acagagaaggaggagggtgttggtcaggactttaagtggcctctatctcagatccgggag
atccacctgcgaaggtacaacctccgccgctcggccctggagatcttcctcatagaccag
accaactacttcctcaactttaagaaagaggtgcggaacaaggtgtacagtaggatgctg
ctgctgcgctccctcagcctgtacggcacacgctcaccacaggagctgctcaaggcctcc
ggactcacacagaaatgggtgaaccgagagatgaccaactttgactacttgatccagctg
aacaccatcgcgggccgaacctacaacgacctgtctcagtacccagtgttcccctggatc
ctgtcggactacacgtcagaggagctggacctgacagacccaggggtgttccgggacctg
tccaagcccgtggccgtactcaacgagcggaacgccaaggctgtacgggagaagtatgag
agttttgaggaccccacggggaccatcgaccggttccactacggtacccactactccaac
gcagcaggagtcatgcactatctcatccgcgtggaacccttcacgtccctccacatcgcg
ctacagagtggacggtttgactgtgcggaccgccagttccactccatcccagctttgtgg
cagaccctcacggacaaccccaacgacgtcaaggagctcatcccagagttcttctacttc
ccggagttcctggagaatcagaacgcctttgatctggggcgcctgcagatctccaaggag
agggtgaatgatgtcatcctgcctaaatgggccaagtctccagaggacttcatttataag
cacaggaaagccctggagtctgagtacgtatcggcccacctgcaagactggatcgatctg
atcttcggttacaaacagcgaggccccgcggccgtggaggccctcaatgtcttctactac
tgcacctacgaaggggcggtggacctggatgcaatcactgatgagaaggagcgtaaagcc
gtagaggggatgatcagtaactttggacagacaccctgccagctgctcaaggagccacac
ccagtacgtctttctctggaggaggtggagaagaggaaaggtcgactagatgcctcgcca
ctcagcatcttcgagcaccttgccgaactcaagtccttctttgtcgaggggatcaatgac
aacgtgcctctggtgaaagccgtggtccccaaaaaccagtcccactccttcatcacccag
ggcagcccagacactatggtgaccctgagtcagaactgtctgatgggaacccacggctgg
ctgccttatgacaagaatatctccaactactttaccttcatcaaggaccccaccgtggcc
aaccccaagacccagcgggtcctgggtgggcccttctctccgggcgtggaggtgacggca
ggtctgtttgtggtgtcacatgacgggaagctcctgttcagcggtggccactgggacaac
agcctgagggtcacctccctggtcaagggaaagactgtgggacatcacatcagacacatg
gacatagtcacgtgcctgtcgacagactactgtgggatccacttgatctctggatccagg
gacaacacctgtatggtgtggcaggtgctgcagcagggaggttgtccggtggggctgtgt
cccaagccggtacaggttctgtatggacacactgacgaggtactgagcgtcagcatcagc
acagagctggatatggccgtctctggatcacgggacgggacggtgatcatccacacggtg
cgtcggggccagtacatgcggtgtctgcggccgccctgtgagagctccctgccggtctcc
atcctgcacctggctatctcttatgaagggtgtgtggtggttcacacctgtgtagagggc
aaggccacgctcaaggataagaacggcctgcacctgtactctgtcaatgggaagcacctg
tgtacggagggcctgaaggagcaggtgacagacatgtgtgtgtccggggagtacctggtt
atcggcagcgagcagggcttcctctccatacgagacctgtacagcctgtccctgtgcgcc
acccccatggcaatgcgtgtgcctgtacgctgcgtgtctgtcaccaaggagcagagccac
gtgctggtgggcctgcaggacggcaagctgatcattgtgggcgtgggcaagccggccgag
gtaaagagctcattcagaaactacatcgcccagagcctggagggctcacccctcatggca
atgccactgctcgccccgctgagggtgcgctcgcccgcccgcaggctgagcctccgggac
aagttaatgtttaacccccagggccctgacccctga
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integrated database retrieval system
