Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373060
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Entry
139373060 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139373060
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139373060
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139373060
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139373060
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139373060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
139373060
NCBI-ProteinID:
XP_070969203
LinkDB
All DBs
Position
18:complement(15091401..15116443)
Genome browser
AA seq
2629 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQTVSPNPSTTEPSPVSPPAAEEEQGQGD
SAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEA
CQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELLA
TATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQ
TLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELK
KEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNAL
NEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEK
ILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKES
WTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKI
LDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFPN
QGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQLN
LKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTVENLRAICLDHAKLGENSLSP
TLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNN
FLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQATHDQ
ALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNFQNFFQASKYIPDLCVIRAVQ
KIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFALLPTAL
DTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGVE
ETILEGHLGVTKELLAFQTPEKKYYIGCENGGANLIKELIDDFIFPASNVYLQYVKSGEF
PTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQENE
TNADGTAREEVFAYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHSSMLSKVLGGSFADQKICRD
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQM
IMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGGTGGSADSGQKERWYK
FDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDAA
GGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYSLEYFQF
VKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPAGDWYD
ALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADGP
CPAPASSPDGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQFFNLFVMYANLGLAE
KTQLLKLSVTATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSINGN
PSLANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQ
FSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDT
IQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYT
GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKVCARGMGVCMFC
RCVCGNVTELSLADSIVCIFFQEPDDQEATEDHDSSPPEDTALYPHNPAPATQFQQQNNH
PQAQPYTGPAAQHMNTPQRPPQRAQESWESTTEEVGPVAPPPTVQTTKE
NT seq
7890 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccccgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccagacagtgtcccccaacccgtcg
accacagagccgtctcctgtgagcccaccggcggcggaggaggagcagggccaaggagac
tctgcccctgctctggaggaggaggagcctgccttccctcacactgacctggccaagctg
gacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaattagaa
gttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgaggcg
tgccagaggtttttcagggacggcctgaccatctccttcactaagatccttacagatgag
gctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacaccggctg
gtggagctgtgtgtgaccaagcttcctcaggactggttccccttactggagctactggcc
acagccaccaacccccactgcaagttccacatctacaacggcacgcggccctctgagacc
atccccgccggggccacgctggccgacgacgagctcttcgcccgcccacccgaccctcgc
tcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggtttcag
actctacacgaccgcttcatgagcggtcaggcactcaacgtgcagatcatcgctgccctc
ataaagccgttcggccagtgctatgagttcctgaccttgcacacagtgaagaagtacttc
ctgccagtgatcgagatggttcctcagttcctggagaatctgacggacgaggagctgaag
aaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtccctgaag
aacctggcctccagggtgcccggtcaggaggagaccgtcaagaacttggagatatttagg
ttgaaaatgatccttaggttattgcagatttcctcgttcaacggcaagatgaacgctctg
aatgaggtcaacaaggtcatctccagcgtgtcctactatacgcatcggcatggcaacccc
gaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccacatc
ctgtccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaactagagaag
atactccgcttcgtcatcaaagagaaagccctcaccatgcaggacctggacaacatctgg
gcagctcaggctggtaagcacgaagccatagtgaagaacgtccatgatcttctggccaaa
ctggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggagagt
tggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcg
gaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaacctggct
cacagtgacgacgtccccgtggacatcatggaccaggccctcagcgcacacatcaagata
ctggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgcttc
atcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatcagagag
atctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcctcat
gtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcactctg
gtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagctgaacac
gcagactttgaccctcagacggtcagagtgggaagtcgctacagtcatgttcaggaggtc
caggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgtgct
cctcaggccaagcagatctggaggtgtctggctgagagcgccgtcttcctgtgtgaccgg
gaggcgtgcttcaaatggtactctaagctaatgggagatgagccagacctggacccggac
atcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctcacggag
aacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgccgcgagggcaaactg
gtggccaaacgcagggcctacatgatggatgacctggagctcataggactggactacctc
tggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctgaag
gagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgaggac
ttcatccagttgtgttttgaccgtctgaaggcgtcgtatgacacgctgtgtgtcctggac
ggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggttcgcgtgctc
accgtgctcaaggagtacatcaacgaatgtgacagcgactaccacgaggagaggtccata
ctgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttccctaac
cagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggctcg
gtgcgccgcggcatccttacacgcatcaaggccaacgccacgcacaccaagatagagctc
ttcattggcggggaggttgtcgacccagcggatgacaggaagctgattggacagctcaac
ctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccctcc
agtcctgacagctcctcagactcctccaccggctcacccagtaaccatggcaaccacttc
agcgaagggcccaacccagaggtggagggctgcctgcctggagtgatcatgtctctccac
ctgcgctacatctcgttcctgtggcaggtagcagacctgggctgtaccctcaacatgcct
ctgctgcgagatggagccaggctcctcatgaagcttatgcctccagacaacggtaccgtg
gagaacctgcgcgctatctgtctggatcatgccaagctgggagagaacagcctgagcccc
acactggactcccgcttctttggcccctcgccctcacaagtcctctacctcactgaggtg
gtgtatgcgttgctgatgccggccagcggcaccctcggcgaggacgccagcgacttccag
tacaacttcctgaagagcggcggcctcccactcgtactgagtatgctcaccaggaacaac
ttcctgccgtcggccgacatggagacgcggcggggggcgtacctcaatgccctgaagatc
gccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcctgc
cagcccgtagtggaggggaccagccccgcatcgccgatcaaccaggcgacccacgaccag
gccctggtcctccagagtgctctacagaatatcccgaaccctgcctctgagtgcatgctc
cgcaacgtggccatacgactggctcaacagatctctgacgagtctctgcccccgaacttc
cagaacttcttccaagcatccaagtacatcccagacctctgtgtgatccgggcggtgcag
aagatcgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaagag
atcagtcagatctatgagaagacgaacgcgggtaaggagccggacggggaggatgagatg
gtgtgctgtgaggcactggagatcatgaccctgtgttttgccctgctgcccaccgctctg
gacactctcagtaaggagaaggcctggcagacttacatcatagacctgctactgcactgc
cacagcaagtcagttcgtcagatggctcaggaacagttcttcctcatggccactaggtgc
tgtatgggacacagacccctcctcttcttcatcaccctcctcttcaccgttttagggagc
acggcaaaggagagggcgaagcacgcaggggactactttacgctgctgaggcacctgctg
aactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaacaatgag
atcgactggctcaagaagatcagggatgaggtgaagcggacaggagagacgggggtggag
gagaccattctagaaggtcacctgggggtcaccaaggagctgctggccttccagacacca
gagaagaagtactacattggctgtgagaatggcggtgccaacctcataaaagagttgata
gatgacttcatcttcccggcgtctaatgtgtacctgcagtacgtgaagagtggggagttc
ccaacggagcaggccatccctgtctgtagcagccccgcctccatcaacgctggcttcgag
ttgttggtggctctgccggtcggctgtgtccggaacctcaagcagatcgttgatacactc
acagatatgtactacctaggttgtgaggctctgacagagtgggaatacctccccccagtg
gggccgcggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctacatg
aactcggtcatccagcagctctacatgatcccgcccatccgtaacggtgtcctggccgtg
gagggcaccggcaccgacgtggacgatgaactgtccggggacgagaagcaggagaacgag
actaatgcagacggaacggcgcgggaggaggtgttcgcctaccaacaccagtttgacgac
aagccctcgctgagtaagtcggaggacaggaaggagtacaacattggggtgctacgccac
ctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccgaggc
ttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcacgatgcc
ctggagttcttcaactctttagtggacagtctggatgaggctctgaaggccatgggccac
tcctccatgctcagcaaggtgctgggaggctcctttgccgaccagaaaatctgccgtgac
tgcccacacaggtatgagtgtgaggagtccttcaccacgttgaacgtggacatcaggaac
caccagaacctgctggactctatggagcagtacgtcaaaggagacctgctggagggagcc
aacgcataccactgtgagaagtgtaacaagaaggtggacacagtgaagcgtctgctgata
aagaagcttcctccagtgctggccatccagctgaaaaggtttgactacgactgggagagg
gagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccc
tacactgtggccggggtggccaagctggagggagatgacggcaacccggagagccagatg
atcatgcagaacgaaccatcggaacccgacccgccaggctgcagttctaagtaccgcctg
gtgggggtgctggtgcattcgggccaggccagcggcggccactactactcctatatcagc
cagcgagacggtggcaccggcggtagcgccgacagcgggcagaaggagcgctggtacaag
tttgacgacggtgacgtgacggagtgcaagatggacgacgacgaggagatgaagagccag
tgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcctac
aggaggcagaagagatggtggaacgcctacatcctgttctatgagaggatggacgcggca
gggggaggggccgcagtggaggcagacggagagctggccaggtgcatctcagagctgact
gtgtctcccactacaccacgacaggtgacgatgccgggggccattgaatgcagtgtgagg
aagcagaacgtccagttcatgcacagccgcatgcagtacagcttggagtacttccagttc
gtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccgggtcaggaccac
ctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttcctc
ttcagtactgggtttcacaccaagaaagtagtccgggggcccgccggtgactggtatgac
gccctgtgcatcctgctgcgccacagtaagaacgtccgctgctggtttgcccacaacgtt
ctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgccgaggtc
cggggggccttcgccaaactcatcgtcttcatcgcccacttctccctggcggacgggcca
tgccccgcccccgccagctcccctgacgggtccacacagggctgtgataacctgagtctg
agtgatcacctgttgagggcagtgttgaacctgcttaggagagaggtgtcagagcacggc
cgacacctgcagcagttcttcaacctcttcgtcatgtacgccaacctgggtctggcagag
aagacccagttgttgaagctgagtgtcactgctactttcatgctggtggctctagacgag
gggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtggtc
tcccagctactgcgctgctgtgacgtctccacacgcatgcagtcgtccatcaatggtaac
ccgtccctggccaacccgtacggagacgccaacctgaccacccccatcatgcccctgcaa
cagctggtgtcagagatcctcttcgttaggaccagctatgtgaagaagatcatcgaggac
tgcagcaactctgaggagacggtcaagctgctgcgcttcagctgctgggaaaacccccag
ttctcctctaccgtgctgtctgagctgctctggcaggtggcgtactcctacacgtatgag
ctgaggccttacctggacctgctgctgcagatactgctgatagaggactcctggcagacc
cacaggattcacaacgtgctgaagggtataccagacgacagggacggcctgtttgacacc
attcagcgctctaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtg
gctctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctgaag
cgtaagtggacatgggcggtggagtggctgggggatgagctggagaggaggccctacaca
gggaacccccagtacacttacaacaactggtctccccccgtccagagcaacgagacctcc
aacgggtacttcctggagcgctcacattccgcacgcatgaccctggccaaggcctgtgaa
ctttgccccgaggaggtacggaaggtgtgtgcgcgtgggatgggtgtttgcatgttttgt
cggtgtgtgtgtggtaatgtaacagagctctccttggctgattccattgtctgtattttc
tttcaggagccagatgatcaggaggcaacagaagatcacgactcctcccctcccgaggac
acagcgctgtacccccataaccctgctcctgccacacagtttcagcagcagaacaaccac
ccccaagcccagccctatacgggtccggctgcccagcacatgaacacgccccagcggccc
ccacagagagcacaggagagctgggagagcaccacagaggaggtggggcccgtggcgccc
ccacccactgtccagacgacaaaagagtaa
DBGET
integrated database retrieval system
