KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373077
Entry
139373077         CDS       T10872                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
  KO
K05214  glutamate receptor ionotropic, NMDA 3B
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020  Calcium signaling pathway
ocla04080  Neuroactive ligand-receptor interaction
ocla04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    139373077
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    139373077
   04082 Neuroactive ligand signaling
    139373077
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ocla04040]
    139373077
Ion channels [BR:ocla04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   139373077
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 139373077
NCBI-ProteinID: XP_070969265
LinkDB
Position
18:complement(16507045..16569869)
AA seq 1441 aa
MEYLYLLGRWMCNYFIPRRIRPSPFFTGRFIPLLVFLHGFVFHPDPCLSHPQPCHILARI
GHTVRLGALLPTRQPARVHNALNRALTSLKHRAGEGNPPLLPYNLTLEVVSRSPSGGDPV
SLSRCVCQELVVRGVTGVLAFPRSPEELIHIDFLSSFLEIPFISLLEDLEPLRVKNRFHL
QMSVRVPPSCLANLLLSVLQGVEGETEGEGRREGGGRGQEGGRGGVAVVCPGWEERGEGL
LKHLETQKATSWNLLDIINLTHIGGEERREERGKEERREERGKEERREERGKEGRRAERS
EETVDETREDKREAEVLSLLSRRLLRSASPLSSVVILGSDPECLSSVLRCAQRLAPSLPA
LQWIMGNPLSPDSLLSLGGPLGLLAYGEVGRKPITFYIRDALRLIGQAVTSASEVRPDLA
LIQNLVNCYDKPNKEEVPSSGQYLARFLSNTSFQGSTGMVRVAPALSQVLSSQLYHVWSL
KRGPLGQPSWVTVAHWTTGRLQLDEGVLGLGVGASLGLGPGRRTGSGSGLGVQRGDRDRD
NSPGGRWRPGLQMAARRLRVVTLVEHPFVFTREVDEDGLCPAGQLCLDPRTNRSDLLDSL
FSHLHQTNTTTTTTDQNPTEDQRKCCYGYVIDLLEKLSEDLKFTFDLYIVGDGKYGAMSS
TGSWSGLVGDLLSGTADMAVTSFSINSARSRVIDFTSPFYSTSLGILVRSQDTSAPIGAF
MWPLHWSMWVGIFVTLHLTALFLTVYEWNSPFGMTPHGRNRLRVFSYSSALNLCYAILFG
RTVATKTPKCWTSRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEQVSGIHDEKLHHPS
RGFRFGTVRESSAEDYMRKSFSAMHDYMRRYNQPTTPDGVDMLKTDPPLLDAFIMDKALL
DYEVSIDAECKLATVGKPFAIEGYGIGVAQGSPLTANVSEFISRYKSEGYMDILHEKWYK
VVPCGKRVFTNTENLSMGIDHFSGLFVMLCVGVVGAIFTLAAEHTFYHLALPRLRRSHTL
TYWLHTSQKIHRALNTPYEDVGKELIGLDHNPSPCVSDSCSLHRHQQPRPPPPPSSPLPA
PPPPQPSSPARDIKENKRVHFDLESLHSYRLHTHTASFWGRPGMVGRHGLGGCLGGLSPP
QVSLHANGGPASALASPGLALPPLGNPGNQAFLWEGELQEVQGRIETFTAQLRDAVTRRA
EIQTCLENHKMNQSTATAVKLEKDKVGQSQSLERVRTNAEKDRTKEEREGLNQEKGKSGR
SNLCSSLDRDRDRDRTSRDSSTVRQTARQDTDRDRLLHQSETERDRDDQSKSLGRNGSRQ
SHASNILQTGRNSQSEALNILQRRREIQSKTSASLDRGTTNQSGAVNTLQGERTVQSRNS
TSLERGRARQSGAVKDQEKGRTVQTRTGASLDRLRAIQSSACTGNLVRERPAPVDTQKSL
C
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggagtatttgtatctacttggtcgatggatgtgcaactactttatacccaggagaatt
cgcccatctccttttttcactgggagatttatcccgctattggtcttcctccatggcttc
gttttccatcccgatccgtgcctctcccacccccagccatgtcacatcctggctcggatc
ggacacacggttcgtctcggtgctctgcttcccaccagacaaccagccagggtacataac
gctctgaacagagccttgaccagcctgaagcaccgggctggagaaggcaacccgcctctt
ctgccctacaacctcaccctggaggtggtgtctcggtccccgtctggtggcgaccctgtc
tccctgtccaggtgtgtgtgtcaggagctggttgtgcgaggggtgacaggtgtcctggcc
ttccctcgttcaccagaggaactcatccacatcgacttcctgtcctccttcctggaaata
ccttttatatcactactggaggacctagaaccactcagagttaagaaccggttccatctc
caaatgtcagttcgtgttccaccctcttgcctggccaaccttctgctctctgttctccag
ggggtagagggggagacagagggtgaagggagaagagaggggggaggcaggggtcaggaa
gggggtagagggggagtcgctgtggtgtgtcctggatgggaggagaggggggagggacta
ctgaaacatctagagacacagaaagcaacaagctggaatctactggatatcatcaacctt
acacatataggaggggaggagaggagggaggagagaggaaaggaggagaggagggaggag
agagggaaggaggagaggagggaggagagagggaaggagggaagaagggctgagagaagt
gaagaaacagttgatgagaccagagaagacaagagggaagctgaggtcttgtctctcctc
tcccgtcgtcttcttcgctccgcctctcctctctcctccgtggtcatccttggttccgac
ccagaatgtctctcttctgtcctccgctgcgcccagcgtctcgctccctcgctccccgcg
ctgcagtggattatgggtaaccctctgtcacctgactctctcctctcgctgggcgggccc
ctcggcctattggcttatggagaggtgggtcgtaagcccatcaccttctacatccgagac
gcgctgcggttgattggccaggcggtgacgtcggccagtgaggtgaggccagacctggct
ctgatccagaacctggtcaactgttacgacaaacctaacaaagaggaagtgccctcttct
ggacagtacctggccaggttcctctccaacacatcattccagggttctacaggcatggtc
cgtgtggcacctgctctctcccaggtcctctcctcccagctgtaccacgtgtggagcctg
aagagaggtcctcttggccagccgtcctgggtcaccgtggcccactggaccaccgggcgc
ctacagctggacgagggggtgttggggctgggggtcggggctagcctggggttaggcccg
gggaggaggacagggtccgggtctgggttaggggtccagagaggggatagggacagagac
aacagtcctggagggagatggaggccggggctacagatggcggcccggagattaagggtc
gtgaccctggtggagcatcccttcgtgttcactagagaggtggatgaggatgggctgtgt
cccgctggtcagctgtgtctggaccctagaactaaccgctcagatctactggactcactg
ttcagtcacctgcaccagaccaatacaaccactaccactactgaccaaaacccaacagag
gaccagcggaagtgttgctatggttacgttattgacctgttggagaagctgtcggaggac
ctgaagttcacctttgacctttacatcgtgggagacgggaagtacggagcgatgagcagc
actgggagttggtccggtctggtgggagacctgctgagtggaacagcagacatggctgtg
acatcattctccatcaactcagccaggagcagagttatagacttcacctctccattctac
tctacctctctggggatactggtgcgtagccaagacacatcagcccctattggagccttc
atgtggcctctgcattggtccatgtgggtgggcatcttcgtcactcttcatcttaccgca
cttttcctcaccgtctatgagtggaacagcccctttggtatgactcctcatggcaggaac
agactcagagtgttctcctactcctcagccctcaacctctgctacgccatactgtttgga
cgcactgtcgctactaagactcctaagtgttggaccagtaggttcctgatgaacctgtgg
gccatcttctgtctgttggtgttgtccagttatacagctaacctggctgctgtcatggtg
ggggagaaaacctttgaacaggtgtctgggattcatgacgagaagctgcaccacccatcc
cgtgggttcaggtttgggacagtcagagagagctctgcagaggactacatgaggaagagt
ttctctgctatgcatgactacatgagacgttacaaccaacccaccacaccagacggagtg
gacatgttaaagacagatcctcccctactagatgccttcatcatggataaagctctattg
gactatgaagtctccatcgatgctgaatgtaaactagccactgtgggcaagcctttcgct
atagaggggtatggtataggtgttgcccaaggctctcctctcactgccaatgtgtctgaa
ttcatcagtcgctacaagtcagaagggtacatggacatattacatgagaaatggtacaag
gtggtgccatgtgggaagcgagtgttcactaacactgagaatttatcgatggggatagat
catttctcaggcctgtttgtgatgttgtgtgtgggggtggttggagccatctttaccttg
gcagctgaacacaccttctatcacctagccctgccccggctacgacggtcacacacactc
acctactggttgcataccagccagaagatccatcgagccctgaacaccccttacgaggac
gtagggaaagagttgattggcctggaccacaatccctccccttgtgtctctgacagctgc
agcctccacagacaccagcagcctcgccctcctcctcccccttcttcccccctgcctgcc
ccccctcctcctcagccctcctctcctgcccgggacatcaaggagaacaagagggtccac
tttgatctggagagtctacacagctaccgtctacacacacacaccgcctcgttctgggga
cgtcctggcatggtggggcgacacggcctgggagggtgtctgggtggtttatctcctcct
caggttagcctgcatgctaacggtgggccagcatcggccctggcctcccccggcctggcc
ctgcctcctctggggaacccaggcaaccaggccttcctatgggagggagagctccaggag
gtccaggggaggatcgagacgttcacagcccagctaagagatgccgtgaccaggagggcc
gagatacagacctgcctggagaaccataaaatgaaccagagcacagctactgctgtcaaa
ctggagaaagacaaggttggccagtcacaaagcctggagagagtgagaaccaacgcagag
aaagatagaaccaaggaagagagagaggggctcaaccaggagaaagggaagagtggcaga
tcaaacctctgtagcagcctggacagagacagagacagagacaggacaagcagggacagt
tccactgtgagacaaacagccagacaggacacagacagggacagactgttacaccaatca
gaaactgagagagacagagacgaccaatcaaaaagcctgggcagaaatgggagcagacaa
tcacatgcctccaacattctgcagacagggaggaacagccaatcagaagctctgaacatc
ctacagaggaggagagagatccaatcaaaaacctctgccagcctggacagagggacaacc
aaccaatcaggtgctgtcaatacactgcagggagaaagaactgtccaatcacgtaactcc
accagtctggagagaggaagagccaggcaatcaggtgcagtgaaagaccaggagaagggg
agaactgtccaaacacggacaggggctagtctggacagactgagagctatccaatccagt
gcctgcactgggaatctggttagagaacgtcccgcccccgtggacacccagaagagtttg
tgttag

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