Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373100
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Entry
139373100 CDS
T10872
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
139373100
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
139373100
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
139373100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139373100
NCBI-ProteinID:
XP_070969300
LinkDB
All DBs
Position
18:17089394..17118856
Genome browser
AA seq
1587 aa
AA seq
DB search
MAAAYRVVVSSVSCYSSVVVDRRAQSHAVHYCSGSCGALSQGLDCTVVHRSTCSELLTAP
SHTHAHTHPDPSHTFTHNLTRNANSPHQIPNSCKFSITSSIGSFGVPNDPNSVYGVVGED
SPPWRGKKANTTTTTTSTGPDRPLQSSASLKDITGEAINLASGKLKEFSFEKLRLSTSHV
TFRKGRKVRPDSYSRRSTDLDIVYGHFTGNVGGTGNGTITGNGNANDENLPPFSDKVLKV
LKGLSPAGITAGGGSLSTTSLSSASRAGGGSTSSLSSACSGSLEAGLNTVASLYLSSLAD
ESLIARLLEKTRAGEEGGVGGAGGEDIRACLDILVKCSEDLKKCTDIIKQCISRKSPGGG
EDGGASPESIYRAVMTRLSSYLRKLPLELEGAGLGLGSGAGGQGSGIGGHSELAELVSSL
HMLQQAAVPFSPIFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPDSSLSLSTTPETAGR
HKVQTNGLLHTHTLSHTHSPSPHTHTLSISTPPTQAHTPSSQTHTPSERTHTPSISPMEA
LFIEEDADLGRGLNRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHV
HVTHTLQSAGEDLTCPPTSEHTPPVTHRDDDIDKLLMDLECLSQSMGRERDRVREGERER
EAEPPLPIKTRQRGTGQGNTSPQTQPSLQTQTQINPQAQRPVPVSHLTANAQANRSTPSS
PAPLLQAEGSVVGLGDEEDRALLLRILESIESFAQELVDSGGSPGNTGKTGAQSKEKEVM
RLLQDTLATAAKTDTLTQAKLPGSPPAGQGDYGPVTTPAPRPTSGAVSTPAPRPTSGAVS
TPAPRPTSGAVATPAPRPTSGAVFTPAPRPTSGAVSTPAPRLTSGAVATPAPRPTSGAVS
TPAPRLTAGAVSMPAPRPTSGAVSTPAPRPTSGAVSTPAPRLTAGAVPTALPVSSAPTPV
PVPVPTTLAESVATDHATPSALPTPVPPPTVVPTPSEAAAKREHPPVADLTAVLTTTATP
PPAVTPVPSPVPPPTPSPVPPPTPSPVPPPTPTPGEAPVATITAPPVAVRHPVAPSDVVA
LRDIGSTLLIQQTPEVIRVQSNKQDKKSGTPPPAPLSPTPYVPPPHRSPSPPPTPVVLPP
PPPPPPPPPALNIPRFYYPRGLPGATKVNHDAAITAIEAAFTEFEEEKADIYEMGKIAKA
CGCPLYWKAAMFNGAGGERTGFVSVHSFIATWRKLLHSCYDDSSKFIYLLAKPGCSYLDQ
EDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQRIFYVVNRSWTGRITMTELRRSNF
LQTLALLEEEDDINQITDYFSYEHFYVIYCKFWELDTDHDLYIDPKDLARYNDHASSSRI
IERLFSGAVTRGSSVQREGRMSYAEFSWFLISEEDKKSPTSIEYWFRCMDTDGDGVLSMF
ELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDLVKPESKGKITLSDLKRCRMAHIFFDTF
FNLEKYLDHEQRDPFALQKDIDNECPEPSDWDKYASEEYEILVAEETANEQLHEGTFDDD
YEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctatcgcgtggtagtgagcagtgttagttgctacagcagcgtggtggtg
gaccgtcgggctcagagtcacgcggtgcactactgctccgggtcatgtggggcgctgtcc
cagggactggactgtactgtggtccatcgcagcacctgctccgagctgctgaccgccccc
tcacacacacacgctcacacacaccccgacccctcacacacattcacacacaacctgacc
cgaaacgctaactctcctcaccaaatccccaacagctgtaaatttagtatcaccagctct
atcgggagttttggtgttcctaatgatcctaacagtgtgtatggtgtggtgggggaggac
agtcctccatggcgaggtaagaaggccaacactaccaccactactaccagcactggtcct
gaccggcctctccagagctctgccagtctgaaggacattacaggagaagccatcaacctg
gctagtggcaaactcaaagagttctctttcgagaagctccgcctctccacgagtcacgtg
acattcaggaaaggtcgcaaggtcaggccggactcctacagccgtcggtccacggacctc
gacatcgtctacggacacttcactgggaacgtcggaggaaccgggaatgggactattacc
ggaaatggaaacgccaatgatgagaacctgcctcctttcagcgacaaagtgctcaaagtg
ctcaaaggcctatcgcctgcaggcatcactgccgggggcgggtctctatccacaaccagc
ctatccagtgcctccagggccgggggagggtccaccagtagcctatccagcgcctgctct
ggttccttggaggcggggctaaacacagtggcgtctctctacctcagctcattagcagac
gagtccctcatcgcccggttactggagaagacccgtgcaggggaggagggaggagtggga
ggagcagggggggaagacatacgggcctgtctggacattctggtcaagtgttcagaggac
ttgaagaaatgtactgacatcatcaagcagtgtatcagtcggaagagtcccgggggaggg
gaagatgggggagccagtccagagagcatctacagagctgtgatgaccagactgagctcc
tatctgaggaaactgcctctagagctggagggggctgggttaggattagggtcaggggct
ggaggtcaagggtcagggattggaggtcatagcgagttggccgagctggttagtagtctc
catatgttgcagcaagctgctgtccccttctcacccatatttgggaatgatcaacctcca
cggtatgaggatgttgttcagaatcctcccttacccaagagcagggatatactgccaccc
tcgtcactcgctccagactcttctctctctttgtccactacgcctgagacagcagggaga
cataaggttcagaccaacgggctgctgcacacacacactctgtcacacacacactctccc
tcaccgcacacacacacgttgtctatttctacccctccaacccaggcacacacaccttca
tcgcaaacgcacactccgtcagagcgaacacacactccgtccatctcccccatggaggct
ctcttcattgaggaggatgcagacctgggaagggggctgaacagggcttccagacacaca
cactcacacacaccgaccagaagcctcacacacactcacagtcggaacgggacagctttt
agtccacacacaccccccagctccgcgcacacacacctcagccccaatctgtcacacgta
cacgttacacacacactccagtctgccggtgaagacctcacctgccccccaacctccgaa
cacacccctcctgtcactcatagagacgacgacatcgacaagcttctgatggacttggag
tgtctgtcgcagagcatgggtcgggagagagacagagtcagagagggagagagagaaaga
gaggcggagccccctctccccattaagaccagacagagggggacaggacaggggaacacc
tccccacaaacccaaccctctctccagacacaaacccaaatcaacccccaggctcaaagg
cctgttcctgttagccacctaaccgctaacgcccaggccaataggtcgacccccagctcc
cctgctcctcttctccaggcagagggcagcgtggtggggctgggagatgaggaggacagg
gccctgctgctgaggatcctggagagcattgagagctttgcccaggagctggtggactct
gggggtagtcctgggaacactgggaagactggggctcagagcaaagagaaggaggtgatg
agactcctacaggacactctggctactgcagccaagactgacactctgacgcaggccaaa
ctacctggatctccaccagctgggcaaggtgactatggacctgtaaccacgcctgcaccc
agacctacatctggtgctgtatccacgcctgcacccagacctacatctggtgctgtatcc
acgcctgcacccagacctacatctggtgctgtagccacacctgcacccagacctacatct
ggtgctgtattcacgcctgcacccagacctacatctggtgctgtatccacgcctgcaccc
agacttacatctggtgctgtagccacacctgcacccagacctacatctggtgctgtatcc
acgcctgcacccagacttacagctggagctgtatccatgcctgcacccagacctacatct
ggtgctgtatccacgcctgcacccagacctacatctggtgctgtatccacgcctgcaccc
agacttacagctggagctgttcctacagctctacctgtctcttcagctcccacacctgtc
cctgtccctgtccccacaaccctagcagagtctgtcgctacagaccatgctacaccttct
gccctacccacacctgttccaccacctacagtcgtacccacaccttcagaagcagccgct
aaacgtgaacatccacctgtagctgacctgacagcggtacttaccaccacagccacccct
ccaccggctgtaacacctgtcccctcccctgtcccgccccctacaccctcccctgtccca
ccccctacaccctcccctgtcccgccccctacacccacacctggagaggcacctgttgca
accatcactgctcctcctgttgccgtgagacacccggttgcccctagcgatgtggttgcc
ctgagagacatcggctcgacgctgctcatccagcagacgcccgaggtgatcagagtccag
tccaacaagcaagataagaaatctggcacccctcctccagcccctctctcccccaccccc
tacgttcctcccccccaccgctccccctctcctccccccactccagtcgtcctcccccct
cctcctccacctcccccacctccccctgccctcaacattccccgcttctactaccctcga
gggttaccgggggcaacaaaagttaaccacgatgcggccatcactgccatagaagcagcc
ttcacagagtttgaggaggagaaggctgatatttacgagatgggcaagatcgctaaggca
tgtggctgtcctctctactggaaggcagccatgtttaacggagcgggaggagagaggacc
ggctttgtctctgttcactccttcattgctacctggagaaagttgttacatagttgctat
gacgattcgtctaagtttatctacctcctggcgaagcctggctgttcctacctggaccag
gaggacttcatacctttattacaggacatagtggacacccacccgggactgacgttcttg
aaggatgccccagaattccattcccgttacatcaccaccgtgattcagcggatattctat
gtggtcaaccgctcgtggacgggtcgcatcaccatgacggaactacgcaggagcaacttc
ctgcagaccctggccctgttggaagaggaggatgatatcaaccagataacagattatttc
tcttatgagcatttctatgtgatctactgtaagttctgggagttggacacggaccacgac
ctttacattgaccctaaggacctggctcgttacaacgaccacgcatcctcaagcagaatc
attgagaggttgttctcaggagccgttacacggggtagctcagtgcagagagaagggagg
atgagttatgcagagttcagctggttcctcatctcagaggaagacaagaaaagccctaca
agtatagagtactggttcaggtgtatggacacagatggggacggtgtgttgtctatgttt
gagttggagtacttctatgaggagcagtgtagtaggatggaggggatgggcattgaaccc
ctacccttcacagacctgctctgtcagatgctagaccttgtcaaacctgaaagcaaaggt
aagataaccctgtctgatctgaagaggtgtaggatggctcatatattcttcgacacgttc
ttcaacctggagaaatacctggaccacgagcagagagaccccttcgctttgcagaaggac
atagacaacgagtgtccagagccttcagactgggataaatacgcttcagaggagtatgag
atcctggtggcggaggagacggctaacgaacagctgcatgaggggacgtttgatgatgac
tatgaggaggcggagcttcctgttcaaggagagatggttgggaataagatggataagctg
ctcatatcagatctgtcagcatga
DBGET
integrated database retrieval system
