Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373101
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Entry
139373101 CDS
T10872
Name
(RefSeq) phospholipase D1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00564
Glycerophospholipid metabolism
ocla00565
Ether lipid metabolism
ocla01100
Metabolic pathways
ocla04144
Endocytosis
ocla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139373101
00565 Ether lipid metabolism
139373101
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139373101
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
139373101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139373101
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
139373101
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
139373101
Endosome - Golgi transport
Others
Others
139373101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
Motif
Other DBs
NCBI-GeneID:
139373101
NCBI-ProteinID:
XP_070969302
LinkDB
All DBs
Position
18:17280034..17303329
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AA seq
1062 aa
AA seq
DB search
MLDKDPPHRLQLTTSDPSDIAVEPGDITDGLGISRKMSDVVESLDTRELDMGDGEETDND
PTTIGDSRIGFSAVYHTVGFKESEARVYLPTVPITAKILEVERFNTAQDRFNITAQRSVN
KSQPAVFKIELRHGEFSWVVKRKEKHFMDLHRELVRYKMFMRVPLPSRSHTTRRRTMKKS
EARHMPELPRGGDELAQDEQVYSRRKQLEDYLNKLLRMAMYRKYYHTMEFIDVSQMSFIH
DLGPKGLEGMIHKRSGGHRIPGLNCCGHSEVCYRWSKRWLVMKDSFLFYMKPDSGAISFV
LLLDKEFSVKMDSKDTETKYGVRIDSLSRCLVLKLNSYRHARWWGQAIEDFVRKHGRAFL
RDHRFGSFAQEEQNIPAKWYVNGKTYMEDVADALEEAKEEIFITDWWLSPEIFLKRPVVE
GNKWRLDCILKRKAQQGVHIFVMLYKEVELALGINSEYSKRTLMHLHPNIKVMRHPDHVS
SSVYLWAHHEKIIIIDQSVAFVGGIDLAYGRWDDREHRLTDVGSVTRSVALEMEQSQSSA
HHPSSRGVSSTDGAANSNGGNQSLPGNPGVELPRLKGIGRTRRMHFSLVKHLHKHTLQHA
DSISSLDSAGSGSVRSLQTGVGELRGNTRFWHGKDYCNFVYKDWIQLEKPFDDFIDRYTT
PRMPWHDISSVVHGKAARDVARHFIQRWNFCKIMKPKYHSLSYPYLLPKSHSSASELRYQ
VPDCVPTRVQVLRSAADWSAGIKYHEESIHNAYLQTIARSKHFIYIENQFFISCSDNKMV
YNKIGEALIERILRAHKEGKKFRVYVVTPLLPGFEGDITTGGGNALQAVMHFNYRTMIRG
EYSIISQLKKEMDELQWMNYISFCGLRTHAELEGRLVTELIYVHSKMLIADDNTVIIGSA
NINDRSMLGKRDSEVAVIIEDSETVTAVMDGHEYQAGSYALALRLECFRTVLGAHMDTTI
DVSDPISDRFYKDVWMTTAGRNATIYEKVFRCLPSSLVRNMSELESYQTNPGLAQSDPGK
AQEELRRIRGFLVQFPLDFLSEQNLMPSVGTKEGMVPTEIWT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctggataaagaccccccccaccgccttcaactgacgacctctgacccctctgacatt
gctgtggaacccggtgacatcacagacggcctcggcatcagcaggaagatgtcggacgta
gttgagagtttggacaccagagagttggacatgggagatggagaggagactgacaatgac
cctaccaccataggggacagtcgtatagggttcagtgctgtgtatcacaccgtgggtttt
aaggagtctgaagccagggtctatctccctactgtccccatcactgctaagatactggag
gtggagaggttcaacacagcccaggacaggttcaacatcacggcacagaggagtgtcaac
aagagtcagcctgcagtgtttaagattgagctgagacatggagagttcagctgggtggtc
aagagaaaggagaaacacttcatggacctccacagagaactggtccgatacaagatgttc
atgagggtgccgctaccctcccgcagccacacaacgaggaggaggacaatgaagaagagt
gaagccagacatatgccggagctaccgcgtggcggagatgagttggcacaagacgaacag
gtctacagcagaaggaaacagctggaagattatctgaacaagcttctaaggatggccatg
tacaggaaatactaccacactatggagtttatagacgtcagccagatgtccttcatccat
gacctgggacctaaaggactggaggggatgatacacaagcgttccggaggtcatcgtatc
ccaggcttgaactgctgtggtcacagtgaagtctgctaccgctggtctaaacgctggttg
gtgatgaaggattcgttcctcttctacatgaagccagactcaggagccatttcctttgtt
ctcctgttggacaaagagttcagcgtcaaaatggactccaaagacacagagaccaaatac
ggagtacgcatcgacagcctctccaggtgccttgtactgaagttgaacagctacagacat
gctcggtggtggggccaggcgatagaagactttgtccgtaaacacgggagggcgtttcta
cgagaccatcgatttggttccttcgcccaggaggagcagaacatccctgccaaatggtat
gtgaatgggaagacctacatggaggacgtagccgatgctctggaagaagctaaagaagag
atcttcatcactgactggtggttgagtccagagatcttcctgaagaggccagttgtggag
ggaaacaaatggagactggactgcatcctcaaacgcaaagcgcaacagggggttcatatc
tttgtgatgctgtataaggaggtggagctagctctgggcatcaacagtgaatacagcaag
agaacactaatgcacctgcaccccaacatcaaggtgatgcgccacccggaccatgtgtcg
tcgtctgtctacctgtgggcgcatcacgagaagatcatcatcatcgaccaatcggtggcc
ttcgttggcgggatcgacctggcgtatggtcgctgggacgaccgagagcatcgcctgaca
gatgtggggagtgtgacacgctctgttgccctggagatggagcagtctcagagctctgcc
caccatccctccagtaggggagtgtcctctactgatggtgctgccaatagcaacggaggc
aaccaatcactgcctggcaacccaggggtggagcttccgcggctgaaggggattggtcga
accaggaggatgcacttctccctggtcaaacacctccacaaacacactctgcagcatgca
gacagcatcagctccttggacagcgctggcagtggttcagtgcggagcctccagacaggt
gtaggagagctgaggggtaacaccaggttttggcatggaaaagactattgcaactttgtc
tacaaggactggatacagctggagaaacccttcgatgacttcattgacaggtacaccact
cccaggatgccgtggcatgacatctcctctgtggtccatgggaaagctgccagggacgtg
gccagacacttcatacagcgctggaacttctgtaagataatgaagcctaagtatcattct
ctctcctacccgtacctcctgcccaagtctcacagcagtgccagcgagctgaggtaccag
gtgcccgactgtgttcccactagagtacaggtgttgcggtcagcagctgactggtcagca
ggtattaagtatcatgaggagtccatccacaacgcctacctccagactatcgccaggagc
aagcacttcatctacatagagaaccagtttttcatcagttgttctgacaacaagatggtc
tataacaagatcggagaagcgctcatcgagaggatcctcagagctcacaaggagggcaag
aagttccgggtgtacgtggtgactccactacttcctgggtttgaaggtgacatcacaaca
gggggaggaaacgccctccaggccgtcatgcacttcaactacaggaccatgatcagaggt
gaatactccatcatctcccagctgaagaaagaaatggatgaactacagtggatgaactac
atctcgttctgtggtctgaggacccacgctgagctggagggacgcctggtcacagagctc
atctacgtccacagcaagatgctcatcgcagacgacaacaccgtcatcatcggttcggcc
aacatcaacgaccgcagcatgttggggaagcgtgacagcgaggtggcggtgatcattgag
gactctgagaccgttaccgcggtgatggacggacatgagtaccaggctggaagctacgca
ctggcgcttcgtctagagtgcttcaggactgtccttggagcccatatggacacgaccata
gatgtgtctgaccctatctctgaccgcttctataaggatgtctggatgaccaccgctgga
cgcaacgcaaccatctatgagaaggtgttccggtgcctgccgtcctccctggttcgtaac
atgtctgagttagagagttaccagacgaacccaggcctggctcagtctgacccaggtaaa
gcccaggaggagctaaggaggatcagagggttcctggttcaattccctctggacttcctc
tcagaacagaacctaatgccttctgttgggaccaaggagggcatggtgcctactgagatc
tggacctag
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