Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373140
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Entry
139373140 CDS
T10872
Name
(RefSeq) F-box and leucine-rich repeat protein 13
KO
K10279
dynein regulatory complex subunit 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139373140
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139373140
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139373140
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
139373140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_EndoS
LRR_Zer-1
LRR_FBXL18
LRR_At5g56370
LRR_14
LRR_8
LRR_RPS2
RHSP
Tex55
Motif
Other DBs
NCBI-GeneID:
139373140
NCBI-ProteinID:
XP_070969381
LinkDB
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Position
2:70857068..70887340
Genome browser
AA seq
845 aa
AA seq
DB search
MASLQNADPALREYILKHSLPQIFQALLTGLCVSCPESPLHFLERKIVYIQENRDTAEID
WHTCVDDPEQVAVTSLAGSMVHDIFGKRDDTLFLSHLFEKAYSCYRISLTNMCFKAWKRF
IWNKRKEARELTLKMETAERHYIQRGLRVALCKWVEWVQVCKRRQNDAMKKIQRVWNAIH
CKIVIGAWRYVVQDSKRTKEYFEKLENGLLEMSSKDSDVAIGEGHDGLSLLPCKLSIKVF
QRLDVGDLLKCAEVCRTWKAIAQTCSLWSRISFSVERDWITDRIVEQILQKYRPFVIHLN
MRGCTSLQWPSFKCISECRNLQELNLSECFNIKDEMVCMILEGCPTLLYLNLSFSYVANG
TLRELSRSCLNLQFLSLACCRRFTDKGLQYLASGKGCHKLIHLDLSGCTQISVEGFRYIA
AGCPLLQQIVFNDMPTLSDSCVLELASKCHSLSAISLWDTPHLSDSAFKAIAEVANLSKF
SVDGNSRMSDISWRALCRSSPGLTRLHAADCPRMTDSSLKSMGALKNLVYLNISHCSRVS
DMGLRYLTEGPSASKLRELNLSNCSRINDLAIMRVAQKCSKLNHLSVSYCDNLSNSGLEW
LSSCSSLLSLDISGCNIMDQGLIALGGNPGLKKLVASECVWITDIGIEKFCRQARGLEYI
DVSHCVALSDQAIKALSFYCRTIVTLRMPGCPKVFTHTQTNNITKISCLLSMHFPYQMTD
LAVQYLTVGRHFLRELDVSGCVLLTDRTPRFLQTGCPQLNTINMVYCRGISKQAALRLQP
CVEKWEHSNDDAPYWFGYDSLGQLLQPIGRPDKIQDTWEEEEPAPRNNKKRNLIKACGED
YEYTA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttacaaaatgctgacccggcgttgagggaatatatactgaagcattccttg
ccccaaatatttcaggcattattaacaggtttatgtgtgtcgtgtcctgaaagtccatta
cattttctggaaaggaagattgtgtatattcaggaaaaccgggacactgctgagattgat
tggcatacatgtgttgacgatccagaacaagtcgccgtgacctcactggcaggaagcatg
gtgcatgacatctttgggaaacgagatgatacactgtttctctcccatttgtttgagaag
gcctactcctgttacagaataagtttaacaaatatgtgcttcaaggcgtggaaaaggttc
atctggaataagcggaaggaggccagggagttgacgctgaagatggagacagctgagagg
cactacatacagaggggcctgagggtcgcactctgcaagtgggtggagtgggtacaggtc
tgcaagagaaggcagaacgatgccatgaaaaagatccagcgagtgtggaatgctatccac
tgtaagattgtcataggtgcttggcgctatgtggtgcaggactcaaaacggacaaaggag
tactttgagaaactggagaatggtctgttggagatgagcagtaaggactctgacgttgcc
attggagagggacatgatggactctcactgctaccttgcaagctctcaataaaggtcttc
cagagactagacgtaggagacctgctgaaatgtgcagaagtgtgtcggacctggaaggcc
atcgctcagacctgctcactgtggagtcggatcagtttctctgtggagagggactggatc
acagaccgcatcgtggaacagatcctacagaaataccggccatttgtaattcaccttaac
atgcgtggctgcacctctctacagtggcccagcttcaaatgtatcagtgaatgcagaaac
ctacaggagctgaacctttcagagtgtttcaacattaaagatgagatggtgtgtatgatt
ctagaaggctgccccactctgctctacctgaacctgtccttctcatatgtggccaatggg
actctcagagagctctccaggagctgtctgaacctgcagttcctgagtctagcatgctgc
cgtaggttcactgataaaggcttacagtacctggcctcagggaagggctgccacaagctc
atccaccttgacctctctggctgcactcagatctcagtggaaggtttcaggtacatagca
gcgggctgccctctgctccagcagatagtcttcaatgacatgcctactctgtcagacagc
tgtgtgctggagctggcctctaagtgtcactctctgtctgccatctccctatgggacacg
ccccatctctcagactccgccttcaaagccatcgctgaggtggccaacctctccaagttc
agtgttgatggtaacagtcgtatgtcagacatcagttggagggctctgtgtcgtagctct
ccaggccttacgagactccatgctgctgactgccctagaatgactgactccagcctaaag
tctatgggcgccctcaaaaacctggtctacctcaacatctcacactgcagcagggtgagt
gacatggggctgcggtacctgactgaggggccttctgcctctaaactgagggagctgaat
ctgagcaactgcagccgcatcaacgacttagctatcatgagggtggctcaaaagtgcagt
aagctgaaccacctgagtgtgtcttactgtgataacctgtctaattctggtctggagtgg
ctcagtagctgttcctctctcctctctctggacatcagtggctgcaacatcatggaccag
gggttgattgctctaggtgggaaccctggcctgaagaagctggttgcctctgagtgtgtc
tggatcactgacattggcatagagaagttctgcaggcaggcgagaggtctggagtatatt
gacgtgtctcactgtgtagctctatctgaccaggccatcaaggctctgtccttctactgc
aggactatagtcacgttacgcatgcctggctgcccaaaggtattcacacacacacaaaca
aacaatattaccaaaatatcttgcctattgtctatgcacttcccctatcagatgacagac
ctggcggtacagtacctgacagtagggcgtcacttcctgagagagctggatgtgagtggc
tgtgttctgctgactgatcgcacaccacgcttcttacagacaggctgcccacagctcaac
accatcaacatggtctactgcaggggaatatccaagcaggcggctctgaggctccagccc
tgtgttgagaagtgggagcacagtaacgatgacgccccctactggttcggctatgacagt
cttggccagctgctgcagccaatcggacgacccgacaagatccaggacacctgggaagaa
gaggagccagcaccaagaaacaacaaaaagaggaatttgataaaggcctgtggagaggac
tacgaatacacagcatga
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