KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373149
Entry
139373149         CDS       T10872                                 
Name
(RefSeq) toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ocla04054]
    139373149
Pattern recognition receptors [BR:ocla04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   139373149
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR TIR_2 LRR_5 LRR_9 LRR_1 LRR_LRWD1 LRR_NXF1-5
Other DBs
NCBI-GeneID: 139373149
NCBI-ProteinID: XP_070969396
LinkDB
Position
18:18618522..18623297
AA seq 969 aa
MTLKITMPGERSGSTFSQLRLCLCFLMYCWVLADPVCGYFLKNCTIRGNLSDNFNMKVLC
YNRNIEVMPINIPCKVSVLDVAMNNISKIRRLDFKGLSNLKILNMSRNQISQVDNDALLP
LKALRELNLAHNRLTTLSDHLFQGLANLSLLHLDNNLIATISSSSFQPLSSLKTVNLTKN
NLHNMKEVQPIVQLPHLQELYIGSNRFTSFQSQEISNMSIELRLLDLSRNPLGVFRITTD
VLPYLEVLDIAYCGQLGHMEWDVLDRSFLRNVKSLNLSGIEMSLERMAMVLQTVNSSLVH
LRLYDISEERVKALIDFACNIPTLSLLRLHHNNISALSEEFLQSCKQVTEVDLENNNIIQ
LSEVSFRSMEQLSTLRLGHNRLSSVPDASRNISTLMLLDLSFNIIHKLGCSDFSNLTGLT
QLFLFHNQISNLPGCVFQDLKDLRILKLGSNKILALNDDFMSGLHKLEFLSMSYNKLSSI
SKGDFKGLASLKTLLLFDNQIASLEDGAFEGLVNLTELRLQSNKITQIDIRNTVLTGLPH
LRTLDISCNYITYVNDDKLDPPPLSHLTSLENLLIFSQRHKGLCHLPINFLEGLTSLLSF
QAGSLNIKDLHPDTFIHTPQLWFLDMSKNEFTALTPKLFHPTPSLNRLYLPKARLQSLDF
LKGANLSRVTFLQVRKNDITTVNETVLQSLPALTYLDMQDNPFTCGCSDAWFVQWMESNN
QTQVVGAGEFTCNYPADLKDTKLLDVELQFCTVDLGLYYYISTTCLVLLTLIASFAYHFL
KWEVIYGYYLFLAFLYDTKQRNKHKPHGCQYDAFISYNAHDEPWVLRELLPELEGEQGWK
LCLHHRDFQPGKPIIDNIMDGIYGSRKTICVISHRYLESEWCSREIQVASFRLFDEQKDV
LILVFLEEIPTHQLSPYHRMRKLVKKRTYLSWPRVGEHTAVFWQQLRLALETKDGPAEEN
PILSGVQAL
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgacactcaagataaccatgccaggagaacgaagtgggtctacattctctcagctgaga
ctctgtctttgtttcctgatgtattgctgggttcttgctgatccagtatgtgggtacttc
ctgaaaaactgcacaatccggggtaatctcagtgacaactttaacatgaaagtactctgt
tataacaggaatattgaagtcatgcctataaatattccttgtaaagtaagtgttttagat
gtggccatgaataatatttccaaaatcagaaggttggattttaaaggactgtcaaacctc
aaaattctaaacatgtccagaaaccagatctctcaagtggacaatgacgctcttttaccc
ctaaaggcgcttcgagagttgaatctggctcataacagactcacaaccctgtcagaccat
ttgtttcagggcctagccaacctctccctgctacatctggacaacaacctcattgcaacc
atcagctcctcatcatttcagcctctctccagtttgaagacagtgaatttaaccaagaac
aaccttcataatatgaaggaagttcagcccatcgtacaattaccacacttacaggagttg
tacattgggagcaacaggttcacctctttccaatcacaagaaatatcaaacatgtctata
gagctgaggctgttggatttatcccggaatccattgggagtcttcaggatcacgacagat
gttcttccttaccttgaggtgttagacatcgcctactgtggccaacttggacacatggaa
tgggatgtcctggacaggtcttttctgagaaacgtcaaaagtctcaacctgagcgggatt
gagatgtctttggagaggatggctatggtgctgcagacagtcaactcctcattagtccat
ctgagactgtatgacattagtgaagagagggtcaaggctctcattgattttgcctgcaat
atacccacacttagcttgctccgactgcatcataacaacataagtgctttgtctgaggaa
tttctgcagtcatgtaaacaagtcaccgaagtggacttagaaaataataatattattcag
ctgtcagaggtatcattcagatcaatggagcaactaagtaccttgagactgggccacaac
aggctttcttccgtaccagatgcctcaagaaatatatccacactaatgctcctggatctc
agcttcaatatcatccataaactgggctgctcagatttctccaatcttacaggactcaca
caactctttcttttccacaatcaaatctccaacctaccaggatgtgtattccaggatttg
aaagacttaaggatccttaaactgggatcaaacaaaatcctggccttgaatgatgacttc
atgagtggtttgcacaaactagaatttttgtcgatgtcatacaataagctgagctcaatc
tctaaaggagactttaaaggcttagcatcactcaagaccctgcttttatttgacaatcag
attgctagtcttgaagatggagcctttgagggattggtgaatcttacagaacttagactc
cagtcaaataagatcactcaaatagacataagaaatactgtgctcacgggacttccacac
ttaagaactcttgatatatcctgtaattacatcacatatgtaaatgatgataaattagac
cctccacccctctctcatctgacatctctggagaaccttttgatatttagtcagcgtcac
aagggactgtgtcatctaccaatcaactttcttgaaggtctgacatctttattgtcattc
caggcagggagtcttaacattaaggacctgcacccagacacattcattcacacaccccag
ttgtggttccttgatatgagtaagaatgagttcacagccctcactccaaagctgtttcac
ccaaccccaagtctcaacagactttatctgcccaaagcccgacttcagtccttagatttc
ctcaaaggagcaaacctcagtagagtcactttcttgcaggtgagaaagaatgacataaca
acagtcaatgagacagtgttgcaatctctccctgccttgacatacctggacatgcaagat
aatcctttcacctgtggctgcagcgatgcttggtttgtccagtggatggagagcaacaac
caaacacaagttgttggtgcaggagaatttacctgcaactatcctgccgatctaaaggac
accaagttgttggatgttgagcttcagttctgtacagtggacttaggactttactactac
atctctaccacttgtctggtcctcctcaccctgatagcatcctttgcctaccacttcctg
aaatgggaggtcatttacggctattacctcttcctggctttcctctatgacaccaagcaa
aggaataagcacaagcctcatggctgtcagtacgatgccttcatttcctacaacgcccac
gatgagccctgggtcctgagggagcttctgccagagctggagggagaacagggttggaag
ctgtgtctccaccaccgggacttccagccaggcaaaccaatcatagacaacattatggac
ggcatctacggaagccgcaagaccatctgtgtcatcagccaccgctacctggagagtgag
tggtgctcccgggagatccaggtggccagcttccggctctttgatgagcagaaggacgtc
ctgattctggtgttcctggaggagatccctacccaccagctgtcaccctaccaccggatg
aggaagctagtgaagaaacgcacatacctgagctggcccagagttggggagcacaccgcg
gtcttctggcagcaactacggctggctttagagaccaaggacggccctgctgaagaaaat
cccatcctctctggggtgcaggctctgtga

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