Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373210
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Entry
139373210 CDS
T10872
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00260
Glycine, serine and threonine metabolism
ocla00270
Cysteine and methionine metabolism
ocla00450
Selenocompound metabolism
ocla00670
One carbon pool by folate
ocla01100
Metabolic pathways
ocla01230
Biosynthesis of amino acids
Module
ocla_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
139373210
00270 Cysteine and methionine metabolism
139373210
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
139373210
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139373210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139373210
Enzymes [BR:
ocla01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
139373210
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139373210
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Met_gamma_lyase
Aminotran_5
Aminotran_1_2
GDC-P
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
139373210
NCBI-ProteinID:
XP_070969571
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All DBs
Position
1:17395142..17403795
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AA seq
405 aa
AA seq
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MASKHQQNDLPAGFRVQFKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQYGPGDHAG
FEYSRSGNPTRNCLEKAVAALDGAKYCFALASGLAATMTITHMLKAGDGVVCMSDVYGGT
NRYFRKIATEFGLDVSFADCTKIELLQAVLKPNTKLVWLETPTNPTMKVVDIQACAAVVH
QHNKDIVVVVDNTFMSAYFQRPLDLGADICMYSATKYMNGHSDVVMGLVSVNNEDLYDRL
KFLQNALGAVPSPFDCYLCNRGLKTLHLRMRQHFKNALAVAKFLEADPRVDRVIFPGLPS
HPQHELMKRQCTGCPGMITFYIKGKLENATTFLSSLKMFALAESLGGYESLAEHPAIMTH
ASVPESDRAALGISDTLIRLSVGLEDEQDIIEDLEQALNAAHPNK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaacaccaacagaacgacttgcctgccgggttccgagtgcagtttaaatct
ttcgcaacagaggcgatccacgttggtcaggaacctgagcaatggaaatctatggcggtg
gtaccacctatttctctgtccaccacgttcaagcagtatggaccaggagatcatgctggt
tttgagtacagtcggagtggaaaccctactagaaactgtctggaaaaagctgttgctgct
ttggatggagcaaagtattgttttgctcttgcttccgggctggctgcgactatgaccatc
actcacatgctgaaagctggagatggcgttgtctgcatgagtgatgtatatggaggcacc
aatcgttacttccggaagattgctacagaatttggcttggatgtctcctttgctgattgt
accaaaatcgagttgctccaggccgttcttaagccaaacacaaagttagtatggcttgag
actcccaccaaccctaccatgaaggtggtggatatccaggcctgtgcagctgtggtccac
caacacaacaaggatatcgtggtggttgtggataacacttttatgtcagcctacttccag
cgccccttggacctcggagcagacatctgcatgtattcagctactaagtacatgaatggt
cacagtgatgttgtaatgggcctggtgtctgtgaataatgaggacctgtatgaccgactg
aagttccttcagaatgccctgggagccgtaccgtccccctttgactgctacctgtgtaac
cgtggcctgaagaccctgcacctgcgcatgaggcagcacttcaagaatgccctggcggtg
gccaagttcctggaagctgaccccagggtggacagagtcatctttccaggcttaccctcc
cacccccagcacgagctgatgaagagacagtgcacaggatgcccagggatgatcaccttt
tacataaagggaaaactggagaatgccaccaccttcctcagcagcctcaagatgttcgca
cttgccgaaagccttggcggttatgaaagtttggcagagcatccggcgataatgacccat
gcgtctgttccagagagtgatagagctgccctagggatcagtgacacactgatacgtctg
tctgtggggctggaggacgagcaggacatcattgaggacctggaacaagccctgaacgcc
gcgcatccgaataagtaa
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