Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373250
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Entry
139373250 CDS
T10872
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139373250
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Other DBs
NCBI-GeneID:
139373250
NCBI-ProteinID:
XP_070969652
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Position
18:complement(24310265..24388641)
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AA seq
1029 aa
AA seq
DB search
MYAGRKRRKPVQKGIEVKDQKEKQTAPSEGTKSNPSKRHRDRLNSELDRLASLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTHACNGLKANSGNHDNSKTTGLVDGWMPEGEL
LLQALNGFVLVITAEGVIFYSSHTIQDYLGFHQTDVMHQSVFDLIHTEDQQEFRRNLHWA
LNPPAVPQQVESPPDGKPVPSSSLVTYNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNCHLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQTKGKTKSKKAKLDKNSSKDHGGLDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSERGEGEGQSSGGYSGGPLGGGVVKSWSSVPNVVTTTTTSTGPNGEPPSSF
DPLLATLDSLSLEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDPDYIPSLN
DLLTNNEILAYIHDSLENKTEEGQGGDSHVSIPPPLTTTHPPGPILNSTLIPNLYNQATP
AMHISTLHPQATNPPIPQPTLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLAKYPWPPTQT
DVPTPSQPDTLQHTNSLTVVDNGHWLPQQEHLLAGLDDHCHSIHPLVNGKTSQLGPQGSG
QLKHHQHQNIIHLQSQWQQQNQHLQVQLQPQCHFKQQKASSNSGAALNGLHPDPDWQRYG
YDDQLELTANGACTVSYTNGCADTLSRATGSEVTLTDYGTGASTTVGMVMNWGTVGGTSH
YQGQGGVTANPSDRLEHHKQHSPQVPSAYFHRQYPTTQNSLDYILGMSHPQHTMPSLGAY
GILNRPASQDATHRKMESGCILNDTVAHTRSCLLPDVNGQTASDSLHPQPGALQTLPTLP
DPQTTGFYL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaaaaggcatcgaagtgaaagaccaa
aaagagaaacagacagctccgtctgaagggaccaagtctaacccatcaaagcgccaccgg
gaccgtctgaactctgagttagaccgtctggccagtctactgcccttcccagaagaggtc
acctccagcttggataaactctctattttacggctcagcgtgagctacctgaggaccaag
aatttcttctcagttgccctgaagacccacgcttgcaatggtttgaaggccaacagtggt
aaccatgacaacagcaagacaacgggattggtggatggctggatgcccgagggtgaactc
ctattgcaggcccttaatggctttgtcctggtcatcactgcagagggggtcatattctac
tcctctcacaccattcaagattacctgggattccaccaaacagacgtgatgcaccagagt
gtgtttgatctgatccacactgaggaccagcaggagtttaggaggaacctccactgggct
ctcaaccccccggccgtgccccagcaggtggagtcacccccagatggaaagccagtcccc
agctcatccctggtgacctataaccccgatcagctgcctccagagaactcctccttcctg
gagaggaacttcgtctgtcgcttccgctgtctcctcgacaattcctcgggcttcctggcc
ctgaccctccagggccgtctgaagttcctgcatggccagaactgccacctggatgacggc
tgcaacgtgcccccccagctggccctgtttgccatcgctacccccctccagcctccatcc
atcctggagatcaggaccaagaacatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgatgccaaggggaagatcgtgctgggctacactgaggctgagctccgg
gttcgaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgatcaagacaggagagagcgggctgacggtgttcagactgctcactaag
gataaccgctggaggtgggtccaagccaacgccagactggtctacaagaacggcaagcct
gattacattatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagg
aagcgttccatgcacctccccttcaccttcgccacgggcgaggcccttctctaccagagt
agctaccccatccacggcctcaccgactcactccagactaaaggcaagaccaagtccaag
aaggccaagctggacaagaactcgtcgaaggatcacggtggactggaccccagctccctg
ctaggggcattgatgcggcaggatgagtccgtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgagcgaggggagggggaagggcagagcagt
ggaggctatagcggtggccctctgggtgggggtgtggtaaagagctggagctccgtgccc
aacgtggtcaccaccaccaccacctccactggccccaacggggagcctccatccagcttc
gacccactactcgccaccctggactcactatctctggagggggacgagacatgctctaac
agcgagctgttctctgctctggagaacctgggtctgaacgcagaggatctggagctactg
ctgctggatgagaggatgatcagagtggagatggatccggactacatcccctcgctcaac
gacctgctcaccaacaacgagatccttgcctacatccacgactcgctggagaacaagacc
gaggagggccagggtggggacagtcacgtgtccataccaccacccttaaccacaacccat
ccccctggccctatccttaattctacccttatccctaacctttataaccaagccaccccc
gctatgcatatctctaccctccacccccaggctactaaccctcctatcccccaacccacg
ttaccccctcacagactaccaaagcagccacccatagtgcagctctcccagcagatgcag
cagcacctcaacttagtaaagcccgttctggcaaaatacccctggcccccgacacaaact
gacgtccccacgccaagccagccagacacactgcagcacacaaactcactaaccgtggtc
gataatggtcactggcttccccagcaggagcatctgcttgcggggctggacgaccactgc
cacagcattcaccccctggtcaacggtaagacatcccagctggggcctcaagggtccggg
cagctcaaacaccaccagcaccagaacatcatccatcttcagagccagtggcagcagcag
aaccagcacctacaggtccagcttcagcctcagtgccatttcaaacagcagaaggcaagt
agcaacagcggtgccgctctcaacgggttgcaccctgatcccgattggcagaggtacggc
tacgacgaccagttggaactgaccgctaatggagcctgcaccgtctcatacaccaacggg
tgtgcagacactctctcacgcgctactggaagtgaggtcactctcacggattacggtacg
ggtgcttcgactaccgtgggcatggtgatgaactggggtacggtggggggcacaagtcac
taccagggacaaggaggggtgactgctaacccctcagaccgtctggagcatcacaaacaa
cattctccacaggtcccatccgcctactttcaccgccagtaccccaccacacagaactcc
ttagattacatcctggggatgtcacatcctcaacacaccatgccttctctgggcgcctac
ggcattttgaatcgccccgcttcccaagatgccactcaccgcaagatggagagcggctgc
atcctcaacgacaccgtggctcacacaaggagctgtctactgcccgatgtgaacggccag
acagccagcgacagtctccacccccagcccggcgccctacagaccctgcccaccctccca
gacccacagactactggcttctacctctga
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