Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373292
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Entry
139373292 CDS
T10872
Name
(RefSeq) neural cell adhesion molecule 2-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139373292
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139373292
04517 IgSF CAM signaling
139373292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139373292
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139373292
04090 CD molecules [BR:
ocla04090
]
139373292
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139373292
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139373292
04091 Lectins [BR:
ocla04091
]
139373292
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
139373292
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
NCAM1/2
139373292
CD molecules [BR:
ocla04090
]
Proteins
139373292
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
139373292
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139373292
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139373292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Ig_6
C2-set_2
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
Izumo-Ig
Ig_5
Adeno_E3_CR1
C2-set_3
C2-set
Motif
Other DBs
NCBI-GeneID:
139373292
NCBI-ProteinID:
XP_070969746
LinkDB
All DBs
Position
18:complement(28097620..28522245)
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AA seq
839 aa
AA seq
DB search
MIIQLLWFLVCGSQAVLQVSISLNKVELSVGESKFFKCTVIGELVNLEWFNPQGERIVSS
QRVALHTGEDSSRLTIYNAEVEDAGIYRCQATDAQGQTQEATMVLEMYQKLTFRNVRSPQ
EFRHDEAAEVVCDVIASPAPAVTWFYQKGFRSMEITEEHYSRFQVLPNNNLQIHKVTKAD
EGVYRCEARVEARGEIDFVDIEVVVNVPPVLSVLQQSFNATADYQESVTFTCITSGSPNP
EVTWHRKGQQLERSEQYVLNTMEAGRSTLTIRNIIQGDGGDYTCRATNKAGAEERELFLK
VFVQPHITQLRNVTAVEGSAAMISCVAEGEPLPEISWRRASDGQSFADGDKSQDGRVDVR
GRHGKSMLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNP
VNISCDVKSNPPATMLWRRERLTISAEGTATTRIHTTDGKSLLEVTPVSDRDFGRYNCTA
RNNIGVKYQEFILAQADVPSNPYSVRLSAVSQRIATVTFMKPDSHGGVPIGHYLVNYKEV
GSQDWRDVKSHGVQTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPP
AVHGQRGMGKTYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQHDFALLQPLQW
NMRYEVEITARNVKGLSEPTFYQFFMPQKPDIIADSLFSGLGLGPVVGLGLVGFLLVLVV
VDVSCYFLRQCGLLMCITRKLCSKKTTTSGKNKEMEEGKAAYLGDGSKDPIVEMRTEEER
ITNHDGSPVHEPNETTPLTEPEKLPLKEENGKETLKPDMIEIKVHSDNSIHTKRDDSKA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattatccaactcctatggtttcttgtctgcggcagtcaagctgttctgcaggtatcc
atatccttgaacaaggtggagctaagtgtgggagagtccaagttcttcaaatgcacagtg
atcggagagctggtcaacctggagtggtttaacccccagggggagcgcatcgtgtcgtcc
cagcgtgtggccctgcacaccggggaggacagctccaggctgaccatctataatgctgag
gtggaggacgcgggcatctaccgctgccaggccaccgacgcccagggacagacacaggag
gccaccatggtgctggagatgtaccagaagctgacgttccgcaacgtgaggtccccccag
gagttccgtcacgacgaggcggcagaggtcgtgtgtgatgtcatcgcctccccggcaccc
gcggtcacttggttctaccaaaagggcttcaggagcatggagatcacagaggagcactac
agcaggttccaggtgctgcccaacaacaacctgcagatccacaaggtgactaaggcggac
gagggcgtgtaccgctgtgaggcgcgagtggaggcccgcggcgagatcgactttgtcgac
atcgaggtggtggtgaatgttcctcctgtgctgtcggtactacagcagtcattcaatgcc
acagcagattaccaggagtcagtgactttcacctgcatcacatcaggatcccccaacccc
gaggtcacctggcacaggaagggccagcagttggagaggtcagagcaatatgtcctcaac
accatggaggcaggcaggagtaccctgaccatccgcaacatcatccagggggacgggggc
gactatacctgccgagccaccaacaaggccggggcagaggagagggagctcttcctcaaa
gtgttcgtccagccacacatcacccagctgcgtaacgtgacggcggtagagggcagcgcc
gccatgatctcctgcgtggctgagggggagccgctccctgagatctcctggaggagagcc
agtgacggtcagagcttcgccgatggagacaagagccaggatgggcgtgtggacgtgcgg
ggccgccatggcaagtccatgttgaccatcagtggggtgaagctaactgacttagggcgt
tttgactgtgaggccctcagcaggatcgggggccaccaaaagagcatgttcctcgatata
gagtacatgcccaagttccagaccaaccaaaccatcttttactcgtgggagggcaacccg
gtaaacatcagctgtgacgtcaagtccaacccgcccgccaccatgctgtggaggagagaa
cgcctcaccatctcagccgagggcactgccaccacacgcatccacacgaccgacggcaag
tccctgctagaggtcaccccagtgtccgacagggatttcggacgctacaactgcacggcc
cggaacaacatcggagtgaaataccaggagttcatcttggcccaggcagacgtgccctcg
aacccgtactcggtgcgcttgtcggccgtgtcacagcgcatcgccacggtgacattcatg
aaacccgactcacatggcggtgtacccattggccactacctggtcaactacaaagaagtg
ggctcgcaggactggagagacgtcaagtcacatggcgtccagactatagtactgctgaca
ggcctagagcccaacaccacctacgaagtgcgagtggctgcagtcaatgggaagggccag
ggggagttcagtcacacggagtccttccagactttacccatacgtgagcccagccctccg
gcagtgcatggccagagagggatgggaaagacctaccggctgggccttgtcaagcaagac
gacgggggcatgcccatcgtggagtacattgtcaagtacaagacagacaaggaggagcag
tggatgacgaagctggtgtcggggcagcatgactttgccttgctgcagccgctgcagtgg
aacatgcgctacgaggtggagatcacagctcgcaacgtcaagggcctttcggagcccacc
ttctaccagttcttcatgccccagaaacccgacatcatagcagactccctgttcagcggc
ctagggttggggcctgtggtgggcctgggcctggtcggcttcctcctggtcctcgtagtg
gtggacgtcagctgctacttcctgcgccagtgtggcctgctcatgtgtatcacgcgcaag
ctctgcagcaagaagacgaccaccagcggcaagaacaaggagatggaggagggcaaggcc
gcctacctgggcgatgggtccaaggatcctatcgttgagatgagaacggaagaggagaga
ataactaaccacgatgggagcccagtgcacgaacccaacgagactacacctctcacagag
ccagagaagctaccgctgaaggaggagaacgggaaggagacgctcaagcccgacatgatc
gagatcaaagtgcacagcgacaacagcatccacacaaagcgggacgacagtaaagcataa
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integrated database retrieval system
