Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373312
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Entry
139373312 CDS
T10872
Name
(RefSeq) unconventional myosin-IXb-like isoform X1
KO
K10360
myosin IX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139373312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139373312
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139373312
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139373312
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139373312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
RhoGAP
RA
IQ
C1_1
RA_2
AAA_22
nSTAND3
C1_2
Motif
Other DBs
NCBI-GeneID:
139373312
NCBI-ProteinID:
XP_070969835
LinkDB
All DBs
Position
1:complement(17494109..17612003)
Genome browser
AA seq
2212 aa
AA seq
DB search
MSVKDGECGAPSQDGRAYNLQVYPRLSADCPSCCTVKVPKEATAASVTQDAALALGLDPK
RLYVLAEVKECGGEEWVLESWDLPVQRVLLWPRKAQEHHLQSEGFYFLLQERNHDGTIHY
VHLPALCKEQEAQKLAARGFLPPRHDDFDDLCNLPSLNESSILDNLRNRFHKKKIYTYAG
SILIAINPFKFLSIYNPKYVKMYENHQLGKLEPHIFAIADVAYYAMLRKRVNQCIVISGE
SGSGKTQSTNFLIHCLTALSQKGYASGVERTILGAGPVLEAFGNAKTAHNNNSSRFGKFI
QVNYLESGVVRGAIVEKYLLEKSRLVSRENNERNYHVFYYLLVGASEEERKEFKLLQPED
YLYLKQQYFKIEDEEDLCHDFERLQQAMEMVGFLSATKKQIFSVLSAILYLGNVTYRRKS
TGRDEGLDVGPPEVLATLSDLLKVKEELLVEALTKRKTVTVNDKLILPYSHSEAITARDS
MAKSLYSALFDWIVLRINHALLNKKDMEESVPCLSIGVLDIFGFEDFETNSFEQFCINYA
NEQLQYYFNQHIFKLEQEEYQAEGITWHNIDYTDNVGCIHLISKKPTGLLYLLDEESNFP
RATDETLLAKFKQQHQGKKYFVPTPVMEPAFVIRHFAGKVKYQIKDFREKNTDHMRPDIV
ALLRSSDRAYVRQLIGMDPVAMFRWGILRATIRGMASFNEAGRRWAAKNAGVQRPTSRTP
LGELQRSNTPVERMYRDMHAQIISSIKDLQLDGEDPRKLLQSWGRLRFPRHLLQKNKNAK
QKQIIPKSLLDSRSLKFIVGRTFHDRTAKSLLHLNKKKKTPSISAQFQTSLTKLLETLGR
AEPFFIRCIRSNSEKKEMCLNETLVLQQLHYTGMLETVRIRRSGYGAKYTFQEFIEQFRV
LLPKNATASKPEDISALFQRMALDHTTYQIGKTKVYLKELERQQLQDTLHKDVMRKIIFL
QYWFRARLERRYFVEMRQAAILIQHAWRRRRKEQQCQAATLIQAVWKGSRQRSEYLRRHT
SIMKIQALARGHSARRRCHSIREERRKKEEEDEEARKKEEEARKREEEEAARQAEEAARL
AREAEVEAARLEMEAEEEAFRRKKEAVREAVEWRAREEVRLRQAERVNKEPETQEEPEAQ
VTAEITLDESQHEDKVPVQNREKQREETEAVEAATTSPPEEVEMGDASTVFQPDEGNGTQ
AEVGPQLEEESQAMEEPEEAHSEEEEGTKEEAAPQSPEKDNGAQAAAEAHRSQVSRSQEK
REQRRQRGMEHSQRESERVALAATKEEPVPKIKGQEAASRAEVKPKERAERADSKELDQY
TFVAWKKEAKATSHTPAPVRPSTLRLNPPEPMDDRNGHNEVLGPGNLVRYSQQGTMKEKA
EKWKGKKTDGRQPEGSSPDDHSKDRRKKHSPSGSNSLDAVSPGSDNSGATSNRELQSAVE
DWSKGSMKRRTHDTSGHQDTVQTLPPTPERSSGFLRKILKKRSHKEAHTPDDGDLSDRGE
ALPLSQTSRSHPDAASGGRTVSQNPTIKISRATHVSEQWNASLEREITNANELRHLDEFL
GNQVNDFRSRGKQLSATENIFITATMQFRETIKGMYSLPTHHIGYKGLMRGYQKRVISLA
GEKQKGEVQLVVNLFQSVLDGFIRGEIKKEEAEPAKPAKARKKRRKKYKNMENPLDHVFS
TYQVNIMQSCDQCNSYIGGMEKVYMCSYCKMVCHKKCLCKIVTDCCTFCAKKSDEESGGL
HFGVRLCHLTSEDNPIPIVLEMMLEHVEMNGLLTEGIYRKSGSANRMRELHQLMETDPHA
VCLENYPIHTVTGLIKQWLRKLPDPLMTFTHYNDFLRAVELPEKQEQLHAIYKVLEQLPT
ACFNTLERLFFHLVKVSKDESHNRMSPNSLAIVFAPCILRCPDSADPLMSMKDVAKTTTC
VEMLINEQIRRYNEKLEEIEQLEHAEALAVNQLKLKRQNTLHWHLPLRVSAPYKGVVVHE
KKCSNLTVVPENDEPLDSDTEAEKNLMERIKSIKQEKEDLACRLPELEQPGSDQDNLDSE
ASLSSESLLGERCNNSEPEGRGVVLLSKAKPNCPPKPSDLAQRPMSPRGCSSSPNLISDV
AFGSTSRLQLPRRRPIIPDTVKLPPGVHSHPPTVDLTPPANGGFSLVKRREQPARRKDSI
QSLYISPDKDLFPSPPSISSLPLSTSTPQSLQTASKALRRFSDPDVPYVDEA
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaagatggtgaatgcggagcacctagccaagatggacgggcctacaacctg
caggtctacccacggctctcagcggactgcccatcttgctgcactgtcaaggtgcccaag
gaggccacagccgcctccgtcacccaggacgcagccttggccctgggcctggaccccaag
cggctctacgtgcttgccgaggtgaaggagtgtggcggggaggagtgggtgctggagtcc
tgggacctccccgtccagagggtcctgctgtggccacggaaggcccaggagcatcacctt
cagagcgaaggtttctacttcctcctccaggagaggaaccatgacggcaccatccactac
gtccacctccccgctctctgcaaggagcaggaggcccagaagctagcagccagaggcttt
ctccccccacgccatgatgactttgacgacctgtgtaaccttccgtcactcaatgagagc
agcatcctggataacctgcgcaaccgcttccacaagaaaaagatctacacctacgccggg
tctatccttatcgccatcaaccccttcaagttcctatccatctacaaccccaagtacgtc
aagatgtacgagaaccaccagctggggaaactagagccgcacatctttgccattgcggac
gtggcatactacgccatgctaagaaagagggtaaaccagtgcattgttatctctggggag
agcggctcggggaagacccagagcaccaacttcctcatccactgtctgacggccctcagc
cagaagggctacgccagcggggtggagaggactattctaggggctgggcctgtgctggag
gcatttgggaatgccaagacggctcacaacaacaactccagccgctttgggaagttcatc
caggtcaactacctggagagtggggtggtgagaggagccatcgtggagaagtatctcctg
gagaagtctcgtctggtctccagagagaataatgagaggaactaccatgtgttttactat
ctgctggtgggagcgtcagaggaggagcgcaaggagttcaaactgctgcagcctgaagat
tacctctacctcaagcagcaatattttaagatagaagatgaggaagacctgtgccatgac
tttgagaggcttcagcaggccatggagatggtcggattcctgtctgctactaagaaacag
atcttctctgtgctgtcggccatcttgtacctgggcaacgtgacgtacaggaggaaatct
acaggccgagacgaggggctggacgtgggacccccggaggtcctggctaccctctcagac
ctgctcaaggtgaaagaggagttgctggtggaggcgctgacaaagaggaaaacggtgaca
gtcaatgacaagctgattctgccctacagccacagtgaggccatcacagcgagagactcc
atggccaagtctctgtacagcgccctgtttgactggattgtcctgcgcatcaatcacgca
ctgctcaacaagaaagacatggaggaatctgtcccgtgtttgtctataggggtcctagat
atatttggctttgaggactttgagaccaacagttttgagcagttttgcatcaactatgcc
aacgagcagcttcagtattacttcaaccagcatatcttcaaactagagcaggaggagtac
caggcggagggcatcacctggcacaacatagactacacagacaacgtgggctgcatccac
ctcatcagcaagaagcccactggactcctgtacctactggacgaggagagcaatttcccc
cgtgccactgacgagaccctgctggccaagttcaagcagcagcaccaggggaagaagtac
tttgtgcccacacctgtcatggagcctgccttcgtcatccgacacttcgctgggaaggtc
aagtaccagatcaaggacttccgggagaagaacacggaccacatgcgtccagacatcgtg
gctctgctgcggagcagtgaccgggcctatgtgcgtcagctgattgggatggacccggtg
gccatgttccgctggggcatcctgcgagccaccatcagaggcatggcttccttcaacgag
gctgggcgccgctgggccgccaagaacgcaggtgtgcagcgccctacttccaggactcct
ttgggggagctgcagaggtccaacacgcctgtagagagaatgtacagggacatgcatgcc
cagataatcagctccattaaggacttgcagctggacggtgaggaccctcgcaaactgctg
cagtcctggggtcggctgcggttccctcgacacctccttcagaaaaacaagaatgccaag
cagaaacagatcatacctaagagcctgttggactctcgctccctgaagttcattgtgggt
cgaaccttccacgaccgcaccgccaagtctctgctgcacctcaacaagaagaagaagact
cccagcattagtgctcagttccagacctctctgactaaactgctggagactttgggcaga
gcagaacccttcttcatccgctgtattcgctccaactctgagaagaaggagatgtgtctg
aacgagaccctggtgttgcagcagctgcactacaccggcatgctagaaacggttcgcatc
cggaggtctggctatggagccaagtacacattccaggaattcattgagcaattccgcgta
ttgctgcccaagaatgctaccgcctccaagccagaggacatctcggccctgttccagagg
atggcgctcgaccacaccacttaccagataggaaaaaccaaggtttacctgaaggagctg
gagcgtcagcagctgcaggacacactgcacaaggacgtgatgcgtaagataatcttcctg
cagtactggttcagagcccgcctggagaggaggtacttcgtggagatgagacaggcggcc
atcttgatccagcatgcgtggcgtagacgccgtaaggaacagcagtgtcaggcagccacg
ctgatccaggctgtgtggaagggctccagacagaggtccgagtacctccgcaggcatacc
agcattatgaagatccaggctctggctagaggacactccgcacggaggaggtgccattca
atacgggaggagaggaggaaaaaggaggaggaagacgaggaggccaggaagaaagaagag
gaagccaggaagagggaggaggaagaggcagcaaggcaagcagaagaggcagccaggcta
gcaagagaggcagaagtggaggcagcccgactggaaatggaagcagaggaagaagcattt
aggagaaagaaagaggctgtgcgggaggcagtggaatggagggcgagggaggaggtaagg
ctgaggcaagcagaacgtgtcaacaaggaacctgagacacaggaggagccagaggcacag
gtgacagctgaaataactctagatgagagccaacatgaggataaagtgcctgtccagaac
agggagaagcaaagggaggagacagaagctgtcgaggctgcaactacttcacctcctgag
gaggtggaaatgggggatgcttctacagtcttccagcctgatgagggcaacggtacacag
gctgaggttgggcctcagctggaggaggagagccaggctatggaggaaccggaggaagca
cactccgaggaggaggaggggacaaaggaggaagctgccccccagtcaccagaaaaagac
aatggggctcaggctgctgcggaggcacacaggtcgcaggtctccaggagccaggagaag
agagaacagcggcgccagcggggcatggagcacagccagcgggagagtgagcgggtcgcc
ttggcagccaccaaggaggagcctgtccctaagatcaaaggtcaggaggcagcaagccga
gccgaggtcaagccaaaagagcgggccgagcgggcagacagcaaggaactggaccagtac
acctttgtagcctggaagaaagaggccaaagccacatcccacacccctgcacctgtacgc
cccagcaccttacgcctgaacccccccgaaccaatggatgacaggaacggccataatgag
gtcctgggtccaggcaatctggttcgctacagccaacagggcaccatgaaggagaaggca
gagaaatggaaggggaagaagactgatggacgacaaccagagggcagcagtcctgacgac
cacagcaaggacagaaggaaaaaacattcaccgagtggtagtaactctcttgatgcggtg
tcccctggctcagacaattctggtgccacttccaacagagagctccagtctgctgtagag
gattggtcaaagggcagcatgaagaggaggacccatgacacctcaggccaccaggacact
gtccaaactctaccgcccaccccagagagatcctcaggtttcctgaggaagatcctgaag
aaacgttcccataaagaagctcatactcctgacgatggagacctgagcgaccgaggagaa
gccctgcctctctcacaaacatcccgctcccacccagacgctgctagtggaggccggaca
gtgagccagaaccccaccatcaagatcagccgggccacgcatgtgtcagagcaatggaac
gcctctctggagagggagattaccaatgccaacgagctccgacacctggacgaattcctg
gggaatcaggtgaatgacttccgctccagagggaagcagttgtctgccacagaaaacatc
ttcatcacagccaccatgcagttcagagagaccatcaagggcatgtactctctcccgaca
caccatattggctacaagggtctgatgcgtggctaccagaagagggtaatcagcctggca
ggagagaagcagaagggagaggtacagctggtggtcaacctgttccagtcagtcctggac
ggcttcatcaggggagagatcaaaaaggaggaggcagaaccagccaagcctgctaaagcg
cggaagaagaggcggaaaaaatacaagaacatggagaaccccctggaccatgtgttcagc
acgtaccaggttaacatcatgcagtcgtgtgaccagtgcaactcctatatcgggggcatg
gagaaagtctacatgtgcagctattgtaagatggtgtgccacaagaagtgcctctgcaaa
attgtcacagactgctgcacgttttgtgccaaaaagagtgacgaggagtcgggaggcctg
cactttggggtgcgcttgtgtcacctgaccagtgaggacaaccccattcccatagtgctg
gagatgatgctggagcatgtcgagatgaacggcctgttaacggagggaatctaccgcaaa
tcaggctccgccaaccgcatgagggagctccaccagctaatggagactgacccccatgca
gtgtgcctggagaactaccccatccacacagtgacagggctgatcaaacagtggctgaga
aagctgcctgaccccctcatgaccttcactcattacaatgacttccttcgggccgtggaa
cttcctgaaaagcaagagcagctacatgccatctacaaagtgttggaacagctccccacc
gcatgcttcaacaccttggaaagacttttcttccatctagtcaaagtgtctaaagatgag
tctcacaaccgcatgtctcccaactccctggccatcgtgtttgccccctgcatcctccgc
tgcccagacagcgccgacccactcatgagcatgaaggacgtggccaagaccaccacttgt
gtggagatgttgatcaacgagcaaatcagacgctacaatgagaagttggaggagattgaa
cagctggagcacgctgaggcgctggccgtcaaccagctcaaactcaagagacagaacacg
ctgcactggcatttgcccctcagggtttctgctccttacaaaggagtggtggtgcatgag
aagaagtgctctaacttgacggtggtccctgagaacgatgagccactggactctgacacg
gaggctgagaaaaacctgatggagcgcatcaagtctataaaacaagagaaggaggacctg
gcctgcagactgccagaactggagcaacctggttctgaccaggacaacctggactctgag
gcatcgctgagctcggagagcctgttgggcgagcgctgcaacaactcggagcccgaaggg
agaggtgttgtcctgttgagtaaggccaagccgaactgccctcccaagccttctgacctg
gcccagagacctatgtccccaagggggtgttcctcttccccaaacctcatctccgatgtt
gcctttggctccacctcccggctccagctaccacgacgccgccccatcatccccgacacg
gtgaagctgcccccgggcgtccactcgcacccccccactgtggacctcaccccccctgcc
aatgggggcttcagcctggtgaagaggcgggagcagcccgcccgacgcaaagacagcatc
cagtccctgtacatcagcccagacaaggacctgttcccctctcctccctccatctcctcc
ctccccctttccacctccactccacagagcctccagaccgccagcaaggccctcagacgg
ttctcagacccagacgtcccctatgtagacgaggcctga
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integrated database retrieval system
