Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373328
Help
Entry
139373328 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139373328
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139373328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF898
TolA_bind_tri
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139373328
NCBI-ProteinID:
XP_070969826
LinkDB
All DBs
Position
18:30441540..30482039
Genome browser
AA seq
676 aa
AA seq
DB search
MEPSPSMNLTMQHGDEEEEQHPLLPSKVVPPPPAFGIQCGRNYSCQKGGDHSVWLDGTQS
SPTLSYYNGCQYVSPSPRSSPRRGDNEEKVRGKEVHKEKRGKKPAGNEQNAGHKDRIWGS
KTKKASPQRRQQDMTSTQSPYKGLRMSQMDLRETESGPPSEGGRRLEVPSMKMQDRQSLP
EIIITTKDDYQPHSPNQTPSSDKNHPKSEAKGAYGGGEETSDAHHKDGVHNCPHKKTQSI
GRRLVRRRALFERRQRLNDCALAVGMFGVVVMITEIELSWSVYSKSSIYSMAMKSVISLS
SLILLGLVIAYHICEVQLYIHDNGSEDWQIAMTTERVSLIALELFVVAVHPFPVGLPLSW
QAMSPTLSETELEIVLALPMFLRLYLLGRALMLHSRLYTDTASRSIGALNKIHFNSRFVV
KTLMTIYPGTVLMIFSVSLWLVAAWGLHVCERHHNYKDLSSNYMEALWMVSVTFLSIGYG
DVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHFTKGIKIA
AANVLRETWMIYKHTKLARKRDHCRVRMHQRKLLLAIHQLRDVKMERRKLADQANTLVDL
CKMQNLMYDMLSEVSGLRGDLETHINSLQQNVEELRQGFRTLIPLLSSTLSTQNSSIRHL
LREREEQADTENGRAG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagccctctccctctatgaacttgacaatgcagcatggagatgaggaggaggagcaa
catcccctccttccatcaaaagtggtccctccccctcctgcttttggcattcagtgcgga
agaaactactcatgtcaaaaagggggagatcactcagtgtggctcgatggaacccagtca
tcacccaccctctcatattacaacggctgccaatatgtgtcaccctcaccccgctcctcg
ccccgaaggggagacaatgaggaaaaggttagggggaaggaggtccacaaggaaaagaga
ggcaagaagccagcagggaatgaacagaatgcagggcacaaagatcggatttgggggagt
aaaaccaaaaaggcaagtccacagaggcgccagcaggacatgacatccactcagtcaccc
tacaaaggactccgcatgtctcaaatggacttaagggagacagaaagtgggccacccagt
gaaggaggtcgaaggctagaggtcccatcaatgaagatgcaggaccgccagagtctacct
gagatcatcattacaaccaaagatgactaccagccacattcccccaaccaaacacccagt
tctgacaagaatcacccgaaatctgaggccaagggcgcctatggtggaggtgaggagacc
agtgatgcgcatcacaaggatggtgtccataactgccctcacaagaagacccagagcatc
ggtcgtaggctggtccgccgaagggcgctgtttgagaggaggcagaggctgaatgactgt
gcactcgctgtggggatgtttggagtggtggtcatgatcaccgagatagagctctcctgg
agcgtctacagtaagagctctatatactctatggctatgaagtctgttatcagcctgtcc
tctctcatcctgctgggtctggtcattgcctatcacatctgtgaggtgcagctctacatc
catgataacggatcagaggactggcaaattgccatgacaacggagcgggtgagcctgatc
gcccttgagctgtttgttgtggcggtgcacccgttcccagtgggtctcccattgtcatgg
caagccatgtcccccacgctgtcagagacggagctggagatcgtgctggctctacccatg
ttcctgcgactctacctcctgggtcgtgcattgatgctgcacagccgactctacacagac
accgcctcgcgcagcattggcgccctcaacaagatccacttcaacagccgttttgtggtc
aaaaccctgatgaccatctaccctggcactgtgttgatgatcttcagcgtctctctgtgg
ctagttgctgcctggggcctacatgtctgtgagagacaccacaactataaggacctgagc
agtaactacatggaggccctgtggatggtctcggtcaccttcttgtccattggttacggg
gatgttgttccccacacctactgtggccgcagcatctgtctactcactggcatcatgggg
gctggttgcacagtgctggtggttgctgtggttgccaggaaactggagctgactagggca
gagaaacatgtccacaacttcatgatggactcccactttacaaaagggataaaaattgct
gcagcaaatgtactgagagagacttggatgatctacaaacacaccaagcttgccaggaag
agagaccactgcagagtacgcatgcaccagaggaagctgctactcgccatccaccagctg
cgtgatgtgaagatggagaggaggaagttggctgaccaggccaacacgcttgtggatctc
tgcaagatgcagaatctgatgtatgacatgctgtccgaggtgagtggattacgaggggac
ctggaaacacacataaacagtctgcagcagaatgtggaggagctgagacaaggcttcagg
accctgatacccctcctctccagcaccctctccacacagaactcttccatccgccacctg
ctaagggagagggaagagcaggcagacacggagaatgggagggcaggatag
DBGET
integrated database retrieval system
