Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373338
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Entry
139373338 CDS
T10872
Name
(RefSeq) CUB domain-containing protein 1
KO
K06732
CUB domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139373338
CD molecules [BR:
ocla04090
]
Proteins
139373338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB_CDCP1_2
CDCP1_CUB_6
CUB_CDCP1_1
CUB_CDCP1_4th
Motif
Other DBs
NCBI-GeneID:
139373338
NCBI-ProteinID:
XP_070969844
LinkDB
All DBs
Position
18:complement(32216040..32238802)
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AA seq
1041 aa
AA seq
DB search
MRLTTICAGVLLGIVILLRLDLSECLHMNVHPDKDAAVTVSSSLFLPLEQCSVCTVRGGE
NDTQTACHSSLALVPDENITLLFNCTELPQRAFAIQIHRKIDCTKDSCSPATGAAQPSLF
PEFIRTLVWHLNVPEMTVLSLDFPSDRLKEMTEAEICQDGYQFAVTRTSTEGEVKTQTYC
RNGLVAHLDILSNATVSLQVQNGGEVNSSIFTATAKPMTKQSRMMSVTPEPDTIVTISRD
AKAKECSVCVGEGPTCNSKELVLKDAHNISVTFTCPQPQYVFSVQINRDIDCTEIACSGN
IVQAESSLFPDFNRTFTWDLKVPPGLSFQLDFPSPGMRQIPPSESCPDEHTYTIITYQRT
GPATIGMFCPDGTITTVQVLYKGRVSLQVPGDRKLEPLDFKVTVGPEIKMLAVIKVNLPR
GVSDTNFLSANYPRGFSDNDLMRWDFMVPGMHNYTVNFLNYTAPLCRKKKVMVIYDKEGE
VGIQKTLVDPQPTHRQGSFTMTMFNCETDKTKQGLSLHFRLSVMRSGHPVLCTVNLSEEE
GPFLHIEKMGSDSHCEMRKDSVVQEKITVPSGTKASLSFLDCPSEDLRLTATKTIGCQSL
DSCSVSGTLLTVPKIPMCLPTLLQSFTWHLNIPVYGTVDLLSPTGNLRQSLPGQECNGSV
SLHIAEGDGSSIGYFCSEGIIRKVQVHSNVSVTATAKDLSLNQGPFLNVSFSDEISESII
YTVQPRMGSPALLATPNWPNGMKPYSTVSWIVNLPGHLQANLLFTNISQPKCGQGHTCIK
VQTLDSPEELLSQREDEAAEDKLMVPESFYLNMSNCLPEDRHFSVLSKVTLQNTSMLLQS
SILWAVGAVLLLMLLVLTVVCLVIRKKKRTMVNEASIFVRKGNIFIPGDGMFPKTRSDNE
SHVYASIEDTMVYGHLLREPSYVGTIQAHFQGQPVDTYRTFMPLQDGVPEITETAADHEP
ELVPEKDMHRPFLDPSESFMPSRPRTPINRHNSMGFMDRRMVDNELCTFKSTGDINTIRL
SGADQILEPEIFIGSDGEESI
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcactacaatttgcgctggagtgctcctgggaattgtgattttgttacgcctc
gacctgtcagaatgtctgcacatgaatgtccaccctgacaaagatgccgctgtgactgtg
tcgtcctcactgttccttccattggaacagtgttccgtgtgcacagtccgtggtggtgag
aatgacacccagacggcctgtcactcatctctggccctggtcccagatgaaaacatcacc
ttgctcttcaactgcactgaactgccacagagggcctttgccatccagatccacaggaaa
atcgattgcaccaaggactcttgcagccctgccacaggtgcagctcagccttccctcttc
ccagagttcattagaacccttgtctggcacctaaatgtgccagagatgaccgttttgagt
ttggacttccctagtgacaggctgaaggagatgactgaagcagagatctgtcaagatggc
taccagttcgctgtaaccaggaccagcactgaaggagaggtcaaaactcagacatactgc
aggaatggccttgtggctcacttagatatactgagcaacgccacggtgtctttgcaagtt
cagaacggcggggaggtgaattcctctatattcacggccactgccaaaccaatgacgaaa
cagagccgaatgatgtcagtgaccccagagccagacactatcgtcaccatcagcagagac
gccaaagccaaagagtgcagtgtgtgtgttggggaggggcctacctgtaactccaaagaa
ctcgtcctgaaagacgcccacaacatctctgtgacgttcacctgcccacagccacaatat
gtcttcagtgtgcagatcaacagggatattgattgcacagagatcgcctgcagcgggaac
attgtccaggcggagtcctccctcttcccagacttcaacagaaccttcacctgggacctg
aaagttccacctggcctttccttccagctggacttcccatcaccgggaatgagacagatc
ccaccctctgagtcctgtcctgacgagcatacctacaccatcatcacttaccagcgcacc
gggcccgccaccatcggcatgttctgcccagatggcaccatcaccacggtccaggtgctg
tacaagggccgagtgtccctgcaggtccctggggacaggaagctggagccgctggacttc
aaggtcactgttgggccggagattaaaatgctggctgtgataaaagtcaacctacctcgt
ggggtgtccgatacaaactttctctcagccaactaccctagaggtttctctgacaatgac
ctgatgaggtgggacttcatggtgcccggcatgcataactacacagttaacttcctgaat
tacacggcgcctctctgccggaagaagaaagtgatggtgatttacgacaaggagggagag
gtgggcatccagaagaccctggtggacccccagccaacacacaggcagggcagcttcacc
atgactatgtttaactgtgagactgacaagaccaaacagggcctgtccctacatttcagg
ctctcggtaatgaggagcggccacccagttctctgcactgtaaatctgtcagaggaggaa
gggccattcctccacattgagaagatgggctctgactcccactgtgagatgaggaaggac
tctgtggtccaggagaagatcacagttccctcagggaccaaagcaagtctttctttcctg
gactgtccaagtgaagacctacgtctgacagccacgaaaaccataggatgccagagtttg
gactcatgctctgtgagcgggactcttctcacggtccccaaaattccgatgtgcctccct
acgctactacaaagcttcacctggcacctcaacatcccagtatatggcactgtggatcta
ctgtcccccacaggaaacctcaggcagtccctgccaggacaggaatgcaatgggagtgtc
tcccttcacatagctgagggtgatgggtcctccattggctacttctgctccgaaggcatc
attcgcaaagtccaagtgcactccaacgtctctgtcactgccacagccaaggaccttagc
ctgaatcaagggcctttcctcaatgtgtccttcagtgatgaaatctcagagagcatcata
tatactgtccagcccagaatgggttcccctgccctcctggccaccccaaactggcccaac
ggtatgaagccgtactccaccgtgtcctggatcgtcaatctgccaggccacctccaggcc
aacctgctgttcactaacatcagccagcccaagtgtggccaggggcacacgtgcatcaag
gtgcagaccctggactctccagaggagctattgagtcaaagggaggatgaggcggcagag
gacaagctgatggtccctgagagcttctacctcaacatgtccaactgtttgccggaggac
agacacttcagtgtgctcagcaaggtcaccctacagaatactagcatgctgctccagagc
tccattctgtgggctgtgggagcagtgctgctccttatgctccttgtgctgacagtcgtc
tgcttggtgataaggaagaagaaaagaacgatggtcaatgaggcttccatctttgtaagg
aaagggaatatcttcatcccaggcgacggcatgttccccaaaacccggtcggacaatgag
tctcatgtctacgcctccattgaagacaccatggtgtatggccacctgctccgcgagccc
agctatgtgggtaccatccaggcccacttccaaggacagccggtcgacacctaccggaca
ttcatgccgctccaggacggagtgccagagatcacagagactgctgcagaccacgagcct
gaactggtgcctgagaaagacatgcacaggcctttcctggacccgtcggaatccttcatg
ccatcaagacctcgcacgcccataaaccgtcacaacagcatgggcttcatggaccgcagg
atggtggacaatgagctgtgcacgttcaagagcactggggatataaatacgattcgactg
tcgggtgcagaccaaatcctagaaccggagatcttcatcggctcggatggggaggaatcc
atttag
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