Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373374
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Entry
139373374 CDS
T10872
Name
(RefSeq) sialidase-1-like
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00511
Other glycan degradation
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139373374
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
139373374
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139373374
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
139373374
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Gene cluster
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Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
139373374
NCBI-ProteinID:
XP_070969916
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Position
18:complement(34574346..34585193)
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AA seq
390 aa
AA seq
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MVATAGLMGLQSRLAVLFSVVLSPCLCTSFVQIKPLVYDEQLLWVSGGAGEVGTYRIPLL
SFTPKGSLLAFAEARKNSANDVGAKFLAMRRSTDRGATWSPTSFILDDGYLVDGLNLGSV
VVDEETGSVLLIYSMCFHQYQCDPASIMLVESMDDGLSWSPPRNLSVQLGVKNFAPGPGF
GIQKHYPPAKGRLVVCGHGTLEGDGVFCILSDDHGRNWKNGAALKSIPYNQPKQALDFNP
DECQPVEMEDGSIVINVRNQNNYHCRCRMVVRSLDGGETLPVEQLVFDPILIDPTVAAGA
LQKEGVMYFTNPADSTHRINLTLRWSLTNGTSWEKNTVQIWAGPSGYSCMTSLTSGSAED
RKFIFVIYEKGHKDYDETISFAKIHLYGGW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaacggctggtttgatggggctacaaagccgactcgcagtgcttttctcggtt
gtgctatctccgtgtctatgcacctcttttgtccagattaaacccctggtttatgatgag
cagttgctgtgggtgagtggcggggcaggggaggtgggcacctaccggatcccactgctc
tcctttacccccaagggcagtctgctggccttcgctgaggcccggaagaactctgccaat
gatgtgggggccaagttccttgccatgcgacgctccacagaccgaggtgccacgtggtct
cccacctccttcatattggatgatggctacttggttgacgggctgaacctgggttctgtg
gtggtggatgaggagactggctctgtgctgctgatctactcgatgtgcttccaccagtac
cagtgtgaccctgccagtattatgttggtggagagcatggatgacggtctcagctggagc
ccaccaaggaacctctcggtccagctaggggttaagaacttcgcccccgggcctggcttt
ggcattcagaagcactaccctcctgccaaggggcgtctggtggtgtgtggacatggcaca
ttggagggtgacggggtcttctgtattctgagtgacgatcacgggcgaaactggaagaat
ggtgccgcactgaagagcatcccctacaaccagcccaaacaagccctggacttcaaccca
gacgagtgccagcctgtagagatggaggacggtagcatcgtcatcaacgtgcgcaaccag
aacaactaccactgccgctgccgcatggtggtgcgcagcttggacgggggcgagactcta
cctgtggagcagctggtgtttgaccccatcctgatagacccaacggtagcagcaggggcg
ctgcagaaggagggcgtgatgtacttcaccaacccagctgacagtacccacaggatcaat
ctaaccctgcgctggtctctgaccaatggcacatcgtgggagaagaacactgtccagatc
tgggcgggcccaagtggctactcctgcatgacgtcacttacgagcggcagcgcagaggac
aggaagttcatctttgtcatctacgagaaaggccacaaagactacgatgagaccatctcc
ttcgccaagatccacctctacggtggatggtag
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