Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373384
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Entry
139373384 CDS
T10872
Name
(RefSeq) cilia- and flagella-associated protein 44
KO
K24224
cilia- and flagella-associated protein 44
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139373384
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
139373384
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
139373384
NCBI-ProteinID:
XP_070969935
LinkDB
All DBs
Position
2:73943333..73966045
Genome browser
AA seq
1829 aa
AA seq
DB search
MDSSEKQPAEDNFQGDPTGKQKASGETESSNVQPPPENNTTSQSAAPAASEQVQQQPGGS
SDAVEEEEERMGMKKLSEDMYYNYDELYSRPVITADSEIPENLLHLTHSFGYDCGRRANL
QLLDERTLAFVAGNQLIFLDVRTKEQRYLRSCSGGGIGTIMAHPSNRYFAVAEKGDQPNI
VIYEYPSLRPYRILRGGTGQAYSFVDFNHEGTLLASVGSAPDYMLTLWEWRHEQVMLRCK
AFSQDVYRVTFSPDNPGQLTTSGSGHIKFWKMASTFTGLKLQGLLGRFGKTALTDIEGYV
ELPDGKVVSGSEWGNMLLWDGGLIKVEICRKGGRTCHAGTIQQFALDEGELMTIGSDGAI
RGWDFESIDTADCNDDSGLFEIEPMNEMVIGRNVSLSSMVKSCLPDSFIWFAQDSNGGIW
KLDLSFSNITQDPECLFSFHAGVIQGMDVSSTSHLMATTTLDRSVRIFDFLAKKELTTSR
YKQGGTTLTWAPRLVNPSGGLVVVGFEDGVVRLLELYNPQSLRVVAGRSRYGDAELRLKQ
AFKPHNAAVTAIAYERNGEILATGSMDCTVFFFTVGDRYDPIGFVTVPGPVQGLEWSPQS
HGKNTLLVLCRSGHVVEVQSPDPEAQNHGTTYHISGLPTRNFTFSSIKSHIKREEEIARR
QALKEKKQKEREAQLKKAKEEGIEPTEEELQEVEEEEELPPLYTPDPPSPLCCGFYSLPG
AFWLSMGGYDSGFLYHCKFSEQQGEDLLQRRDEPFTFLPVQNTDEDPICTITFSSSRQLL
LCGMQSGSVRAYPLQPPDFHLTSMQAFWALSVHDNQYGQLRQLRCSFDDQFVLTTGEDGN
IFSFSLLPQEDLLKALQCSKAKVPSPRVGVEMEGVAQDIEDPSAYSIETSKQKLEMDRMR
REAEMRKVERRKMLAELQNQFKQLLEKNQGLPEHVRLHRTELELDWRFREETERMTAQRV
REARKELAWEEERHRIGLQKLQERFWDSLESDTVTVVAFQSDHRISTYRLLALSQRFHEL
KQRGRVGGPGTVGQERWRNKAEAGKDSSNITADQEDLGEEAVMAPHVVRPGGSKLAGRQA
EKLRKATEKAERARVKIEKRRKEWAELYATKPNENCEDPEDVRAIRLATENMGDFKLKTA
KDFTVPEHLRMNAEKKRAQLVHLEEKIHERKTQMNSRIMALRDTKVSLVSRLRSQAQQLQ
AVQERLAPHFCSPAPTLPSLLPEETPETKLRYTRTTLQRYGALRAQRACTRGQELEGGQT
LLEQLEAELEKQEETPCHTPADMREREVEESGVTELEEEMREVEEIRLLYEEESLLEQMS
SSMWQFDAELCLLRHEKLCLDIQMKLADLRHVTLFQELLLLKEFEKRENSLQERLNACVE
EEEDLRSKLEECKQALELKRRDISKLQERERAIAATFQASLGENNKFADFLTRVFKKKIK
RVKKKEKAGDDEEQEDSDEDSDEESDWDEDEDDSGSESGGPLDDSVCPPNCNSELFENTV
QLRERRLDLEELLVEERKTADNLRKECDSLVKKEKVVHGSLKAAEGDLELFNREKQQKLN
ELDVVVPLRLHQIEFVSNGVVPCSLAPALVLNTVALGGLQERIKELQVEKSEQRDLYRQA
RQQHVQLIHDRKDMEAKIQSLEARCEQLMLMKFGKLVDLEALQTLSGNRNLEEMRQDSRV
REAAYTQEVRQWEMKVTEARHAVTEVTRHHTERLLSMNSLLSQKKEMEDKLNTRQSRMGT
QFQGRRHAEEDERQRLYQLVQSQAQEANALRQEINILSRKGGHILPPSQAPLPPLPDAPS
RSTRTNPERLNRHFKLGGGHPSTTSQGVE
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctgagaaacaaccagctgaagacaattttcaaggtgaccccacaggaaag
cagaaagcttctggggaaacggaaagctcaaatgttcagccacctccagagaacaacaca
acttcccaatcagcagctcctgcagcttctgagcaggtgcagcagcagccaggtgggagt
agtgatgctgtggaggaagaggaggagcgaatggggatgaagaaactctctgaggacatg
tactacaactatgacgagctgtactccagaccagtcatcactgcagactcggagatccca
gagaacctgctgcaccttacgcactcttttgggtatgactgtgggcgcagggctaacctg
cagctgctggatgagcgaacgctggcctttgtggctggaaaccagctcatattcctggat
gttcggaccaaggagcaacgctacctccgctcctgcagtgggggaggcatcggcaccatc
atggcccaccccagtaataggtattttgctgtggcagagaagggagaccagcccaacatc
gtaatctatgagtatccctcactacgaccctaccgcattctcagaggtgggacagggcag
gcttacagctttgtggactttaaccatgagggcaccctgctggccagtgtgggtagtgct
ccggactacatgctgaccctgtgggaatggagacatgaacaggtgatgctgcgctgcaag
gccttctcacaggacgtctacagggtcaccttttcacctgacaatcctgggcaactcacc
acctccggatctggacacatcaagttttggaaaatggccagcacttttactggtctcaaa
ctgcaagggcttctgggaaggtttgggaagactgccctgacggatatcgagggttatgtg
gagctgcctgatgggaaggtagtgtcggggtctgaatggggaaacatgctgctgtgggac
gggggcctgatcaaggtagagatatgccgtaaggggggcaggacgtgccacgctggcacc
atccagcagtttgctttggacgagggggagctcatgaccatcggctccgatggagccatt
aggggctgggactttgagagcattgacacagcagactgtaacgatgacagcggtctgttt
gagattgagcccatgaacgagatggtgattggacgcaacgtcagcctgtcctccatggtc
aaaagctgcctgccagactccttcatctggtttgcccaggattccaatggaggcatctgg
aaactggatctttcattttccaacattacccaggacccagagtgtctgttctccttccat
gctggagtgatccagggaatggatgtgtccagcactagccatctgatggccaccaccact
ttagaccgctcagtgaggatttttgacttccttgcaaagaaagaactaacaaccagccgc
tacaaacaaggtggaacaacactgacctgggcgccacgcctggtaaaccctagtggaggg
ctggtggtggtgggctttgaggacggggtggtccgtctgctggagctctacaacccccag
agtttacgagtggttgccgggcgcagtcgctatggagatgccgagctccgtctcaaacag
gccttcaaaccccacaatgcagctgtgacagccattgcatatgaacgtaacggcgagatc
ctagctactgggagtatggactgcactgtgttcttcttcactgtgggggacaggtatgac
cccattgggtttgtcacagtaccaggacctgtacaggggctggagtggtccccccagtca
catggcaaaaacaccctgctggtcctgtgtaggagtggtcatgtagtggaggtccagtct
ccagacccagaggcccagaaccacggcaccacctaccacatctctggcctccccacaaga
aacttcaccttcagcagcatcaagtcacacatcaagcgggaggaggagattgcgcgcagg
caggctctgaaggagaagaagcagaaggagagagaagcacagctgaagaaagccaaggag
gagggcattgagcccactgaggaagagctgcaggaggtagaggaggaggaagagctgccc
cctctttacacccctgacccccccagccctctctgctgtggcttctactctcttcctggg
gccttctggctctccatgggaggctatgattcggggttcctgtaccactgtaagttttcc
gagcagcagggtgaggacctgttacagcgcagggatgaaccgttcaccttcctgcctgtc
cagaatacagacgaggaccccatctgcaccatcaccttcagctcaagcaggcagctgttg
ctgtgtggcatgcagtcaggcagtgtccgggcctaccctctgcagccacctgacttccac
ctcacatccatgcaggccttctgggccctcagcgtccatgacaaccagtatggacagctg
cgccagctgcgctgtagctttgacgaccaatttgtcctgacgacaggggaggatggcaac
atcttctccttcagcctactgccccaggaggacctgcttaaagccctgcagtgcagcaag
gccaaagtcccctcaccacgggtcggcgttgaaatggagggtgtggcccaagatattgaa
gacccgtcggcatacagcattgagacgtctaagcagaagttggaaatggaccgtatgcgt
cgggaggctgagatgaggaaggtggagagacgtaagatgctggccgagctgcagaaccag
ttcaaacagctactggagaagaaccagggtctgcccgaacacgtccgcttgcaccgcacg
gagttggagctggactggcggttccgtgaggagactgagaggatgacggcccagagggtg
agagaggccaggaaggagctggcctgggaggaggaacgccaccgcatcggactccagaaa
ctacaggagaggttctgggattctcttgagtcggacacagttactgtggtagcgttccag
agtgaccacaggatctccacctatcgtctgctggcactgtcccagaggttccacgagctg
aaacagaggggaagggtggggggcccggggacagtggggcaagaacgttggaggaacaaa
gccgaggccggcaaagacagttccaacatcacagcggaccaggaggacctgggtgaggag
gctgttatggcgccccatgtggtgcgtccagggggcagcaagctggctggccgccaggca
gagaaactccgcaaggctacggagaaggcagagcgggcccgagttaagatagagaagagg
aggaaagagtgggctgaactgtatgccacaaagcccaatgagaactgtgaggatccggaa
gatgtgcgagccatccgattggctacggagaacatgggtgacttcaagctgaagactgcc
aaagactttacggtcccagaacacctgaggatgaacgcagagaagaagagagctcagctg
gtccacttagaggagaagatccatgagaggaagacgcagatgaacagtcgcataatggcc
ctaagggacactaaggtgagcctcgtgtcacgcctgcgctcccaggcccagcagctacag
gctgtccaggagcgcctagcgcctcatttctgcagccctgccccaaccctgccctccctg
ctgcccgaggagacccctgagacgaagctacgctacacccgcaccaccctgcagcgctac
ggggccctgagggctcagagggcctgtactcgtggccaggaactagagggggggcagact
ctgctggaacagctggaggcagagctagaaaaacaggaggagacaccctgccatacacct
gcagatatgagagagagggaggtggaggaatctggggtgaccgagctggaggaggagatg
agggaggtggaggagatcaggctgctgtatgaagaggaatccctgctggaacagatgtcg
tcgtcaatgtggcagtttgatgcggagctgtgcctgctgcgtcacgagaagctgtgtcta
gacatccagatgaagctggctgacctgcgccatgtcaccctgttccaggagctgctgctg
ctcaaagagtttgagaagagagagaactccttgcaggagagactcaatgcctgcgtggaa
gaagaggaagacctcaggtctaagttggaggagtgtaagcaggcactggagctgaagcgg
agggacatctccaagctccaggagagagagagggccatagctgccaccttccaggcctct
ctaggggagaacaacaagtttgctgacttcctcaccagggtcttcaagaagaagattaaa
cgcgtcaagaagaaagaaaaggctggagatgacgaggagcaggaggacagtgatgaagat
tctgatgaagagtctgactgggatgaggatgaggatgacagtggctcagagagcggtggt
cctctggatgacagcgtctgccccccaaactgtaactcagagctgtttgagaacacggtg
cagctccgtgagcgtcgtctggaccttgaggagctgctagtggaggagaggaagactgca
gacaacctgaggaaggagtgtgactccctcgtcaagaaggaaaaagtggttcatggcagt
ctgaaagcagcagagggagacctggagctgttcaacagagagaaacaacagaagctcaat
gagctggatgtggtggttcccctcagactgcaccagatagagtttgtgagcaatggggtg
gtaccgtgcagcctggccccagcactggtgctgaacacagtggcattgggaggactacag
gagaggattaaagaactgcaggtggagaagagtgaacagagagacctctacagacaggcc
aggcagcaacacgtccagctcattcacgaccgcaaggacatggaggccaagatacagagt
ctggaggcgcgctgtgagcagctgatgctgatgaagtttgggaagctagtggacctggaa
gccttacagactctgtctggcaacagaaacctggaggagatgagacaggatagcagagtc
cgagaggccgcttacacacaggaggtcagacagtgggagatgaaagtgacagaggcccgt
catgcggtgacagaggtgacaaggcatcacaccgagcgtctcctcagtatgaacagcctg
ctgagccagaagaaagaaatggaggacaaactcaacaccaggcagagcaggatgggtacc
cagttccagggccgtcggcatgctgaggaggacgagaggcagaggctgtaccagctggtc
cagagtcaagctcaggaggcaaacgccctccgccaggagatcaacatcctgtccagaaag
gggggtcacatcctgccccccagccaggccccattgccccccctgcccgacgccccatcc
cgctccacccgtaccaacccagagaggctcaacagacacttcaaactgggaggggggcat
ccatccaccaccagccagggggtggaatag
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