Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373390
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Entry
139373390 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139373390
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GFIT
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NCBI-GeneID:
139373390
NCBI-ProteinID:
XP_070969939
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Position
18:complement(35493289..35511514)
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AA seq
999 aa
AA seq
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MKNDLSMEPPLTFKEENISTVERVQQERPAITAPSCVSMKSDQSMDPPLRFRDGVVSEQI
AQQELSRQFKTVLSSDLPEGFEMNQKELADALEKSELALICQRELKSNLKTKYQSAFEGI
AKQGNPTLLNKIYTELYITKGGNGEVNNEHEVRQMETTTRKQARPETAIKCNDIFKPLPG
QDRPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQFVFSLPFRELNLMKGEKHSLF
ELLDHFSMETNKSRISNFDKYKVLFIFDGLDECRLPLDFKRNTSCCDVTESTSVDMLLTN
LIKGNLLPSALLWITTRPAAANQIPSGCVDQVTEVRGFNDSQKEEYFRKRFSDKNLASRI
ISHMKSSRSLYIMCHIPVFCWISATVLEKMGEEGRELPQTLTEMCTHFLVFQTKQTNEKY
LAKEETGPHWNKTSILSLGKLAFQQLVKGNLIFYEEDLKECGIDVREASVYSGVCTQIFR
EECGLYQVKVFCFVHLSIQEFLAAVYVFLRFSNDNENLIAKQQLIFKTFWFRKIPAIDFH
KSAVDKALESAGGHLDLFLRFLLGLSLESNHKHLQGLLTKPLSSPQSHEETVMYIKEKIR
ENPTPERCINLFHCLNELNDHSLVKEIQSYLSSGNVSSEKLSPALWSALAFVLLTSEEDL
EVFDLKKYSKSEEGLLRLLPVVKASRTALLSDCGVTEEGCASLASALKTNPSHLRELDLS
NNDLKDSGVKMLSAGLQDPQCKLETLRLSGCLVTEEGCASLVSALRLNPSHLKELDLSYN
HPGYLGVRLLSARLEDPHCRLERLNVDHGGEHTMKPGLRKYAFELKLDPNTSHRNLSWSE
VNRKVTCGNGSQPYPDHPERFQDRPQVLCREGLSGRCYWEVEWSGKWVMIGVAYKGISRR
GQHNDCVLGANDKSWCLFCSDKYYNARHNNERTVTSSGSHRVGVYLDWVAGTLSFYMYGI
STDTLIHLHTFHTTFTEPLYPGFGVSWSKSSVSLCQIAS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgacctgtctatggaaccacctctcacatttaaagaggaaaacatttctact
gtagaaagggtccagcaggagagaccagccatcacggcacccagctgtgtgtctatgaag
agtgaccagtctatggatccacctttaaggttcagagatggagttgtttccgaacaaata
gcccaacaggagctatcaagacagttcaagacagtgctgagttcagatctccctgaaggc
tttgagatgaaccagaaggagcttgctgacgcactggagaaaagtgagcttgctttgatt
tgccaacgggaactcaaatctaatctaaagacgaaatatcaaagtgcatttgagggtatt
gctaagcaagggaacccaacacttctcaataagatctacacagaactctacatcacaaag
ggtggaaatggagaggtcaataatgaacatgaggtaagacaaatggagacaacaaccagg
aaacaagcaagaccagagacggcaatcaaatgtaatgacatattcaaacctttacctgga
caagacagacctatcagaactgtgctgacaaagggagtcgccggcattggaaaaacagtc
tctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaattt
gtattttcacttccttttcgggagctgaatttgatgaaaggggaaaaacacagtttgttt
gaacttctcgatcacttctcaatggaaacaaataaatcaagaatctccaactttgacaag
tacaaagttctgttcatctttgatggtctggatgagtgccgactgcccctagacttcaag
aggaacacgagctgttgtgatgtcacagagtcgacctcagtggatatgctgctgacaaac
ctcatcaagggaaatctgctgccctctgctcttctctggataactactagacctgcagca
gccaatcagatcccttcaggatgtgttgaccaggttacagaggtgcgagggtttaatgat
tcacaaaaagaggaatactttagaaagagatttagtgataagaacttggccagtagaatc
atctcacacatgaagtcatcaaggagcctctacatcatgtgccacataccagtcttctgt
tggatctctgccacagttttggagaaaatgggtgaagaagggagagagttgccccagact
ctaactgagatgtgcacacacttcctggtatttcagaccaaacagacgaatgaaaagtat
cttgcgaaagaagagacaggtccacactggaataaaacaagcattctgtcactgggaaaa
ctggcttttcaacagcttgtgaaaggcaatctaattttctatgaagaagacctgaaagag
tgtggcattgatgtcagggaagcctcagtgtactcaggagtgtgcacacagatcttcaga
gaggagtgtgggctgtaccaggtcaaggtgttctgctttgtgcatctgagcattcaggag
tttctggctgctgtatatgtgtttctcagattcagcaatgacaatgagaatctaatagcc
aaacaacagttaatcttcaaaacattttggttccgaaaaatacctgcaattgacttccac
aagagtgctgtggataaagccttggagagtgcgggtggacaccttgatcttttcctccgc
ttccttctgggcctctcactggagtcaaatcataagcacttacaaggtctactgacaaag
cctttaagcagcccacagagccatgaggaaactgtcatgtacatcaaggagaagatcagg
gagaatcccactccagagaggtgcatcaatctgttccactgtctgaacgaactgaatgac
cattctctcgtgaaggagatccaaagttacctgagctcaggaaatgtctccagtgaaaaa
ctctcacctgcactgtggtcagctctggcctttgtgttgctgacttcagaagaggatctg
gaggtgtttgacctgaagaaatactccaaatcagaggaaggtcttctgaggcttctgcca
gttgtcaaagcatccagaacagctctgctgtcagactgtggagtcacagaggaaggttgt
gcttctctggcctcagctctgaagacaaacccctcacacctgagagagctagatctgagt
aacaatgacctgaaggattcaggagtgaagatgctctctgctggactgcaggatccacaa
tgtaaactggagactctgaggctgtcaggctgtctggtcacggaggaaggctgtgcttct
ctggtctcagctctgaggttaaacccctcacacctgaaagagcttgacctgagctacaat
cacccaggatacttaggagtcagactgctctctgctcgactggaggatccacactgcaga
ctggagagactcaatgtggatcatggtggagaacacacaatgaaacctgggcttagaaaa
tatgcgtttgagctcaaactggacccaaacacttcacacagaaacctctcttggtctgag
gtgaatagaaaggtgacatgtgggaatgggagtcagccgtatcctgatcacccagagaga
tttcaggaccgtccacaggtgctgtgtagagagggtctgtctgggcgctgttactgggag
gtagagtggagtgggaaatgggttatgataggagttgcatataaaggaatcagcaggaga
ggacaacataatgactgtgtgcttggagccaatgacaagtcctggtgtctgttctgctct
gataaatattacaatgccaggcacaataatgagagaactgtcacctcctctggctcccac
agagtaggagtatatctggactgggtggccggcacgctgtccttctacatgtatggtatc
tccactgatacactgatccacctgcacacattccacaccactttcactgagcccctgtat
cctgggtttggggtcagttggtccaaatcctcagtttctctgtgtcagatagcctcctga
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