Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373397
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Entry
139373397 CDS
T10872
Name
(RefSeq) protein argonaute-4 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139373397
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139373397
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
139373397
microRNA pathway
RISC loading complex
139373397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139373397
NCBI-ProteinID:
XP_070969952
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Position
18:complement(36502932..36539594)
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AA seq
889 aa
AA seq
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MCVFLCLDPPIGPPAPTSLFQPPRRPGMGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKP
EKRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEG
KDQTFKVSLQWVSVVSLQMLLEALSGHNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSP
PEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNIN
EQTKPLTDSQRVKFTKEIRGGWGPAGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQL
ENGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTD
NQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAP
MLQYGGRVSTDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGMEIKVWAVACFAPQK
QCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLSYVGLQLIVV
ILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVP
HQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQ
EQLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKA
CISLEEDYRPGITYIVVQKRHHTRLFCSDKTERVGKSGNVPAGTTVDSTITHPSEFDFYL
CSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVA
FRARYHLVDKDHDSAEGSHVSGQSNGRDPLALAKAVQIHYDTQHTMYFA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtttctgtgtttggacccccctataggcccgccggcccccacctccctcttc
cagcccccacggaggcctggcatgggcaccgtggggaagcccatccgcctgctggccaac
cacttccaggtgcagattcccaagattgatgtctatcactacgatattgacatcaagcct
gagaaacggccaaggagggttaacagggaggtggtggacaccatggttcgccacttcaag
atgcagatctttggtgatcgacaaccgggctacgacgggaagagaaacatgtacacggcc
catccactacccatcgggagagacagggtggatctggaagtaactctgccaggggagggt
aaggaccagacgttcaaggtgtctctgcagtgggtgtcagtggtgagcctgcagatgctc
ctggaggccctgtcaggccacaacgaggtccccgaggactctgttcaggccctggatgtc
atcacccgccacctgccttccatgaggtacaccccagtggggcgctccttcttctcccct
ccggagggctactaccaccccctgggcggagggagggaggtgtggttcggcttccatcag
tcggtccgtcctgccatgtggaacatgatgctcaacatcgacgtctccgccactgctttc
taccgtgcccagcccgtgattgagttcatgtgcgaggtgctcgacatccagaacatcaac
gagcagaccaagccactcaccgactcccaacgcgtcaagttcaccaaggagatccgaggt
gggtggggacctgcaggtctgaaagttgaggtcacccactgtggtcagatgaagaggaag
tatcgcgtgtgcaatgtcactcgccgccccgccagccaccaaacgttccccttacagctg
gagaatggccaggccatggagtgtaccgtggctcagtacttcaagcagaagtacagccta
cagctgaaatacccccacctgccctgcctacaagtggggcaggaacagaagcacacctac
ctacccctggaggtttgtaacattgtggccgggcagcgctgcatcaagaagctgacagac
aaccagacctccaccatgatcaaagctacagcacgttctgcacccgacaggcaggaagag
atcagccgactggtcaaaagcaacagcatggtgggcggtcccgacccttacctgaaggag
ttcggaatcgtggtgcacaacgacatgaccgaggtgacgggccgagtcctcccagcaccc
atgctgcagtatgggggacgggttagtaccgacactgggcgggactgtggcaggggactc
tctccgcagaacaagaccgtggccacgcccaaccagggcgtgtgggacatgcgggggaag
cagttctacgccgggatggagatcaaggtgtgggccgtggcctgcttcgccccacagaaa
cagtgcagagaggacctgctcaagagcttcacagaccaactgagaaagatctcgaaggat
gccggtatgcccatccagggccagccgtgtttctgtaaatacgcccagggagcggacagc
gtggaacccatgttcaaacacctcaagctgtcttatgtgggactgcagcttatcgtggtc
atcctgcccggcaaaacccctgtctacgcggaggtgaagcgggtaggagacactctcctg
ggcatggccactcagtgtgtccaggtgaagaacgtggtgaagacatccccccagactctc
tccaacctctgcctcaagatcaacgccaagctggggggcatcaacaacgtcctggtgccc
catcagagaccctctgtgttccagcaacccgtcatcttcctgggggcagacgtcactcac
cctccagccggcgacggcaagaagccctccattgcggcggtggtgggcagcatggacggc
caccccagccgctactgtgccacggtgcgcgtgcagacgtcgcgccaggacctgtcccag
gagcagttgtacagccaggaggtcatccaagacctgaccaacatggtgcgcgagctgctg
atccaattctacaagtccacgcgcttcaagcccacccgcatcatctactaccgcggcggc
gtgtccgagggccaaatgaaacaggtggcgtggccagagctgattgccatcaggaaggcc
tgtatcagcctagaggaggactaccgaccgggcatcacctacatcgtggttcagaaacgc
caccacacccgcctcttctgctcagacaagacggagagagttggaaagagtggcaacgtc
ccagccggaaccacggtggacagcacaatcacccacccctcagagtttgacttctacctg
tgcagccatgctgggatccagggcaccagccggccctcccactaccacgtcctgtgggac
gacaactgcttcacagccgacgagctccagctgctcacctaccagctgtgccacacctac
gtccgctgcacccgctcagtctccatccccgcgccagcctactacgcccggctggtggcc
ttccgcgcccgctaccacctggtggacaaagatcacgacagtgcggagggcagccacgtg
tcgggccagagtaacggtcgggacccccttgccctggccaaggcagtccagatccactat
gacactcagcacactatgtatttcgcctga
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