Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373407
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Entry
139373407 CDS
T10872
Name
(RefSeq) protein argonaute-3-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139373407
03036 Chromosome and associated proteins [BR:
ocla03036
]
139373407
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139373407
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139373407
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
139373407
microRNA pathway
RISC loading complex
139373407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
139373407
NCBI-ProteinID:
XP_070969972
LinkDB
All DBs
Position
18:complement(33894205..33943263)
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AA seq
878 aa
AA seq
DB search
MEIGTSGDVGAQALFSVPRRPGFGTMGKPIKLLANCFQVDIPKMDVYLYEVDINPEKCPR
RVNREVVDSMVKHFKVTIFGDRRPVYDGKRSLYTANPLPVATAGVDLDVTLPGEGGKDRP
FKVSIRFVSLVSWHMLHEVLTGRTMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEVDPFVQEFQFRVRDEMAQVTGRVLPAPGLQ
YGGRASSEHFMPQQVNPVVSLQNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQ
CREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGSDSVEPMFRHLKNTYAGLQLIIVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQD
LASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACIMLEKEYQPG
ITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSR
PSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKE
HDSAEGSHVSGQSNGRDPTALAKAVQIHHDTLRTMYFA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacttcaggagatgttggggcccaggccctgttctcagtgccacggcgg
cctggctttggcactatggggaagcccatcaagctgctggccaactgcttccaggtggat
atccccaagatggacgtctacctctatgaagtagacatcaatcccgagaagtgcccgcgt
cgcgtcaacagggaggtggtggactccatggtgaagcacttcaaggtgaccatctttggg
gaccgaaggccagtctacgatgggaagaggagtctctatacagccaaccccctaccagtc
gccacagcaggggtggatctggacgtcaccctgccaggggaggggggtaaggatcgcccc
ttcaaagtgtccatcaggtttgtgtcgctagtcagctggcacatgctgcatgaggtcctg
acagggcgcaccatgcctgagcccttggagctggacaagcccatcagcaccaaccctgta
cacgctgtggacgtggtgctgcgacacctgccctccatgaagtacaccccagtggggcgc
tccttcttctccgcaccagagggttacgatcatcccctgggcgggggtagggaggtgtgg
ttcggcttccaccagtcggtgcggcccgccatgtggaagatgatgctcaacattgacgta
tcggccacggctttctacaaggcccagccggtgatccagttcatgtgcgaggtcctggac
atccacaacatagacgagcagccccggcccctcaccgactcccacagggtcaagttcacc
aaagagatcaaaggtctgaaggtggaagtgacccactgcgggacgatgcggaggaagtac
agagtgtgtaacgtgacccgccgccctgccagccaccagacgttccccctgcagctggag
aatggtcagacagtggagcgcacggtggcccagtacttcagagagaagtacagcctgcag
ctgaagtacccccacctcccctgcctccaggtggggcaggagcagaaacacacctatctg
cccctggaggtgtgcaacatagtagctggccagcgttgtattaaaaaactcactgataac
cagacgtccaccatgatcaaagccacggcccgctctgccccagacagacaggaggagatc
agcaggctggtgcggagtgcgaactatgaggtggacccgttcgtccaggagttccagttc
cgcgtgcgtgacgagatggcgcaggtgacgggccgtgtgctgccagcccccgggctgcag
tacggcggcagggcgagctcggaacacttcatgccccagcaggtgaaccctgtggtgtct
ttgcagaaccgcacggtggccacgcccagccacggcgtgtgggacatgaggggcaaacag
ttccacactggggtggagatcaagatgtgggcaatcgcctgcttcgccacgcagaggcag
tgtcgtgaggagatcctcaagggtttcacagaccagctgcgtaagatctctaaggatgct
gggatgcccatccagggccagccatgtttctgtaaatacgcccagggatcagacagtgtg
gagcccatgttcaggcacctgaagaacacctacgctggcctgcagctcatcatcgtcatc
ctacctgggaagacccctgtctatgctgaggtaaagcgggttggagacacccttctcggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacgtccccccagaccctttcc
aacctctgcctcaagatcaacgtcaaactggggggcatcaacaacatcctggtcccacac
caacgtccctcagtgttccagcagcctgttatcttcctgggggccgacgtcactcaccct
ccagccggagacggaaagaagccatccatcgcagcggtggtgggcagtatggacgcccac
cccagcaggtactgtgccacagtgagggtccagagacccagacaggaggtgatccaggac
ctggcctccatggtgcgggagctcctcatccagttctacaagtctacccgctacaaaccc
accagaatcatattttacagggatggcgtgtcagagggacagttcagacaggtgctgtac
tatgagctgctggcgatcagggaagcctgtatcatgttggagaaggagtaccagccgggc
atcacctacatcgtagtgcagaaacgccaccacacacgcctcttctgtgcagaccgcaat
gagcgggttggacggagtggtaacattcctgcaggcaccactgtggacacagatatcact
cacccctatgagtttgacttttacctctgcagccacgcaggaatacagggtacgagccga
ccatcccattaccacgtcctgtgggacgacaactgcttcacggctgacgagtttcagctg
ctcacctaccagctgtgccacacctacgtccgctgcacccgctctgtctccatccccgcg
ccagcctactacgcccacctggtggccttccgtgcccgctaccacctggtggacaaagaa
catgacagtgcggagggcagccatgtctcggggcagagtaacggccgagaccccacggcc
ctcgccaaggctgttcagattcatcacgacacactgaggactatgtatttcgcctga
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