Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373428
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Entry
139373428 CDS
T10872
Name
(RefSeq) neuronal pentraxin-1-like
KO
K25709
neuronal pentraxin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
139373428
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GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
HlyD_2
Motif
Other DBs
NCBI-GeneID:
139373428
NCBI-ProteinID:
XP_070970010
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Position
18:37730814..37756207
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AA seq
671 aa
AA seq
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MADNAIPPLMLLSTGQTRWGGVLPGFILPSFPLFYLLLYTLISSSAAAVSLPGLDYDYGA
QPKFVCTPIPADADPSCFTTGGAAHGPVHDRPSSNGHHGPAAGAPNGNGRRPMGMGMGIG
ISDEAKSTILHLRESLVRQKETILDQRETIRELTAKLTLCEGFGRGVGHHDDHHDDHHGN
ARHNSHHPSSHHSYHDADHHGDPHYPLNNGHRSDPHHRGKDNSGSKHGVFSPEQTRKTLQ
TLKERLENLQARNSSSSYSSSLRDLLQRKINALEKQLNNHYGGHHDYGHHDDHHDDHHDD
HHDDHPDDHHDDHHEPGHRDDHHDDHHDDHHDDDHDTHTPTRYNNRPNNRQNSHHDDHHY
DRHYDRHYDRSHSRHDTHHNDHHDDHHDDHPDDHHDDHHDDLHDDHRENGDDHQGNDDHG
HRPRPAYNSKPPPPLPLGRGHNKLETVLSHLNHRNSNPGTRKKPKSPDAFQIGFPMRTNY
MYGRIKKTLLIEIFTLTVCLWIKGGSGPGLGTPFSYSVPGQANELVLIEWGNNPMELLVN
DNAVTLPMAMTDGKWHHLCMTWSSHDGHWEAFQDGVKRGSGENLSAWHPIKPGGVFILGQ
EQDTLGGRFDATQSFVGEMSDLQLWSRVLTPNEIYSQASCGGHLAGDLISWTEAVVELHG
GVTKYPFDPCH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgccatcccacccctgatgcttttgtctacagggcaaacgcgttggggt
ggagtacttccaggtttcatcctaccctctttccctcttttttatctactcctctatact
ctcatatcttcctcagcggctgctgttagtttgccgggattagactatgactatggagcc
cagcccaagtttgtttgcaccccaattccagcggacgcagaccccagctgcttcacaaca
ggcggggcagcacacggacctgtccacgacagacccagcagtaatgggcatcatggacct
gctgcaggggcgcccaatggtaacggcaggaggccgatgggaatggggatggggatagga
atatcagacgaggccaaatccaccatcctgcaccttcgcgagagcctggtgcggcaaaag
gagaccatcttagaccaacgggagacgatcagggaactgactgccaagctgaccctctgt
gagggctttggccggggggtgggtcatcacgatgaccatcacgatgaccaccatggaaac
gcgcgtcacaactcccatcacccaagctcgcatcactcctaccatgacgctgaccaccac
ggggacccacactacccactgaacaatgggcaccgatcagacccacaccaccgagggaag
gataactctgggagcaagcatggggtcttctcccctgagcagactaggaaaacgctacag
acactcaaggagaggctggagaacttgcaggccaggaattcctccagctcctattcaagc
tcactgagagacctcctgcaacgtaaaatcaatgcacttgagaagcagctcaacaatcac
tacggtgggcatcatgattatggtcaccatgacgaccaccacgatgaccaccatgacgac
caccacgatgaccatccggacgaccaccacgacgaccaccatgaacctggtcaccgcgat
gaccaccacgatgatcatcacgacgaccaccatgatgacgatcacgacacccacacccct
acccgctacaacaaccgccccaacaaccgtcaaaacagtcaccatgatgaccatcactat
gaccgacactatgaccgccattatgatcgtagccacagccgccatgacacacaccataac
gaccaccatgatgatcaccatgacgaccatcctgatgatcatcacgacgaccaccacgat
gatcttcacgatgaccaccgtgaaaacggtgatgaccaccaaggcaatgacgaccatggc
catcgtcctcgtccagcctataacagcaagccaccacctccattgcctcttggccgtgga
cacaacaagctggaaactgtgctgagccaccttaaccacaggaactctaaccctggtacc
cggaaaaagccaaagagtccggatgctttccagattggcttccctatgcgcactaactac
atgtatggaaggataaaaaagaccctactcattgaaatcttcaccctcactgtctgcctc
tggataaaagggggttcagggcctggcctcggcacgcccttctcctactctgtcccggga
caggccaacgaactggttctgatcgaatggggcaacaatcccatggaactactggttaat
gacaatgcagtgacgttgcccatggctatgacggatgggaagtggcaccacctgtgcatg
acatggtcgtcacacgatgggcattgggaggccttccaggatggcgtcaaaagggggtct
ggagagaacctatctgcatggcatcccatcaagcctggtggagtctttattctgggccag
gaacaggataccctaggtggccgatttgacgccacccagtccttcgtgggcgagatgtca
gacctccagttgtggtcccgcgttctcacacccaatgaaatctatagccaggcttcctgc
ggaggtcacctggcgggtgacctcatctcctggacagaggcagtggtcgagcttcacggc
ggggtcaccaaatacccctttgacccctgccactaa
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