Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373478
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Entry
139373478 CDS
T10872
Name
(RefSeq) protein MTSS 1-like isoform X1
KO
K20128
metastasis suppressor protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139373478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139373478
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139373478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
WH2
Motif
Other DBs
NCBI-GeneID:
139373478
NCBI-ProteinID:
XP_070970136
LinkDB
All DBs
Position
18:39856876..39902468
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AA seq
749 aa
AA seq
DB search
METVIERECSALGGLFQTVIGDMKSSYPVWDDFISKAGKLQSQLRTTVVAVAAFLDAFQK
VADLATGSRGGTRDIGSALTRMCMRHRSIEAKLRQFSMVFIDCLINPLQDQMEEWKRVAN
TLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKADVFGRGDIQPQLDNAMQDISDKYLLL
EETEKQAVRKALVEERSRFCTLVSMLRPVVEEEMSMLGEITHLQTLTDDLKALTMDPHKL
PPASEQVILDLKGSESSWSYQTPPSSPSTTASRKSSMCSSLNSVNSSDSRSSGSHCHSPT
SHYRYRSSALPQQGPARLSSVSSHDSGFISQDAYQSKSPSPMPPDTHPQLSNGYDHHHQG
PSAAPYLSGGGMQEVYPDLPPSSPSTPLASPSYSPTSPEWAWSRPGSALLVDSPPYCTLG
PGMIPSSKVLTWKDWAKPGPYDQPMVNTLRRTKEKRETPDPSSPQATTPGDEPQRAKGTN
AVIQREEAEAHEELALALARGLQLDIQRSSRDSLQCSSGYSTQNTTPCCSEDTIPSQVSD
YDYFSVGGDQETDQPDFDKSSTIPRNSDISQSYRRMFHAKRPASTAGIPTTAPSPASIVT
PGVATIRRTPSSKPNLRRPSGSLGLGPIPVKPPMIPVKTPTVPEHPGVFFRGESEGGGPL
SPRSPLSSAGDNGLLVSPKATWDTQAPSDPPTSPPQSGSRLSEWDREALPEVQEEEPGCG
EGEDVLLAIRRGVKLKKTASNDRSAPRIV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggagactgtcattgaaagagaatgcagtgcgctcggaggactttttcaaacagtgata
ggcgacatgaagagcagttacccagtgtgggatgacttcatcagcaaggccgggaagcta
caatcacagctcaggacgacagttgtcgcggtagccgccttcctggacgcctttcagaaa
gtggctgatctggcaaccggcagcagaggtggcaccagagacatcggttcagccctcacc
aggatgtgtatgaggcaccggagcatcgaggccaagctcaggcagttctccatggttttc
atcgactgcctgattaaccctctgcaagaccagatggaggagtggaagagagtggccaac
acgctggacaaggaccacgccaaagagtacaagaaagcccgtcaggagatcaaaaagaaa
tcctccgacactctcaagctgcagaagaaggctaagaaagctgacgtgttcggccggggg
gacatccagccccagctggacaatgccatgcaggacatcagtgataagtacctgcttctg
gaggagacagagaagcaggcggtcaggaaggccctggtggaggagcggagccgcttctgc
accttagtctccatgctgaggcccgtcgtggaagaggagatgtccatgttgggggagatc
actcacctgcagaccctcactgacgacctgaaggctctgaccatggacccccacaagctt
ccccctgccagcgagcaggtcattctggacctgaagggatctgagagcagctggtcctac
cagacccctccttcctcccccagcaccacagcatccaggaagtctagcatgtgcagtagt
ctgaacagcgtcaacagcagcgactctcgctccagcggctctcactgccactcccccacc
tcccactaccgctaccggagctccgccctccctcagcaaggccccgcccgcctttctagt
gtctcttcccacgactccggcttcatctcccaggatgcctaccagtccaagtcgccctcg
cccatgccccctgacacccacccacagctgtcaaacgggtatgatcatcatcatcagggg
ccctccgcagccccctatctgtctggcgggggcatgcaggaggtctaccccgacctccct
ccatcctccccctccacccccctcgcctcgccctcctactctcccacctcccccgagtgg
gcatggtcgagaccaggttccgccctcctggtggacagccccccctattgcaccctggga
ccgggcatgatcccctcctccaaggtcctcacctggaaggactgggccaagccagggccc
tacgaccagcccatggtgaacaccttgaggaggaccaaggagaagagggagactccagat
cccagcagcccccaggccaccacaccaggggatgagccccagagagccaagggcaccaat
gcagttatacaacgggaggaggcggaggcccatgaggagctggccctggctctggcccgc
gggttgcagctggatatccagcgctccagcagggactccctgcagtgctccagtggctac
agcacccagaacaccacgccctgctgctctgaggacaccatcccttcacaagtgtccgac
tacgactacttctccgtgggtggtgaccaggagacagaccagcccgacttcgacaagtcc
tccaccatcccccgcaacagtgacatcagccagtcctaccgccgcatgttccatgccaag
cggccggcctccacagcgggcatccccaccacggccccctcccccgccagcattgtcacc
cccggggtggccaccatccgccgcacgccctcctccaagcccaacctacgccggccctcc
ggaagcttgggtctgggccccatccctgtcaagccccccatgatccccgtcaagacgccc
actgtgcccgagcaccccggggtgttcttcagaggagagagtgagggagggggaccactg
agcccccggagcccactctcttcagcgggtgacaacgggttgttggtgtctcccaaggca
acttgggacactcaggccccctccgatcctcccacttccccacctcagtctggtagtagg
ctgtcggagtgggaccgcgaggccctgccagaggttcaggaggaggagcccgggtgcggc
gagggggaagacgtgctcttggccatacggcgaggggtcaagctgaagaagacggcatcc
aacgaccggtcggcgccgcgaatagtgtga
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