Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373484
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Entry
139373484 CDS
T10872
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Others
EARP complex
139373484
Endosome - Golgi transport
Tethering complex
GARP complex
139373484
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139373484
NCBI-ProteinID:
XP_070970154
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Position
18:39204681..39215750
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AA seq
724 aa
AA seq
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MADRAVTAAMSDVNTTVHSTANSMAYLQDEMKPDTDAMAPLNLGDLDLTTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVEDELQRIEQASIKDYIKESQNIASLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNMRLKNRQAVRSHLSQLVDELVVPG
AMIQVILESPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKIKAVTKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAEL
EGPILIPHTAQRGDCRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSVM
GKTLSLFLKSMSTYVSDCYDSIAVFLCIHIILRFRAITNKRTIPALDKYWDAVLELLWPR
FELILEMNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFTSERTHTLLGQL
QVEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLQARSQE
FIEEILSSPFGGMIAFVKESEALTEKGQLDRLKNDEARITQLVRGFSSTWKQSVEALSQD
VMRSFTNFKNGTGIIQGALTQLIQYYHGFHKVLAQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagagcagtgactgctgctatgtccgatgtaaacacaactgtccactcaacg
gcgaattccatggcatatttacaagatgagatgaagcctgacacagatgccatggccccg
ctcaacctgggcgacttggacttgaccacagatgagttcatcttggatgaggtggacatt
cacatacaggctaatcttgaagatgacttggtgaaggaggcgttgaaaacgggagttgac
ctccggcaatactctaaacaagtggaggatgaactccaacggattgaacaagcttccatc
aaagactatatcaaggagagccagaatattgcctctctgcacaaccagatcacagcctgt
gactccatactggagcgaatggagggcatgctgagcggcttccagagtgacctctcgtcc
atcagcagtgagatccagactctgcagcaacagtcggtcagcatgaacatgcggctgaag
aacaggcaggctgtacgcagccacctcagccaactggtggatgagctggtggtgcccgga
gctatgatccaggtaatcttggagagcccggtgacagagcaggagttccttgagcagctc
catgagctcaacaacaagatcaactttgccaaagagctcagcttcagggagactttggcc
tgctctgacatccaggacattgtggaccgcctcaaaatcaaggctgtcacaaagatccga
gaatttatcctgcagaagatttattccttcagaaagcccatgaccaactatcaaatcccc
cagaacaccctcctcaagtacaggtttttctatcagttcctcttggcaaacgaaaggaca
gtggccaaggagatcagggatgaatatgtggacaccatgagtaagatctactacagttac
ttcaagtcgtacagcggcaggctcctcaaagtacagtatgaagaggtggcagacaaagat
gacttgatgggagtggaagacacggccaagaaaggtttcttctccaagccctccctgaag
agcaggaacaccatcttcaccctgggccagcggggggccgtgctgagccctgccgagctg
gaggggcccatcctcatcccccacactgcccagagaggggactgcaggtacccctatgag
acgctgttccgcagtcagcactacgccctcttggacaacggctgtcgagaattcctcttc
ctgtctgacttcttcatggtggctggaaattctgcgctggacctcttcaacagcgtcatg
ggaaagacgctcagcttgttcctgaagagcatgtccacctatgtgtcggactgctacgac
agcatcgccgtgttcctgtgtatccacatcatcctgcgtttcagagccatcacaaacaag
aggaccatcccagccctggacaagtactgggatgcggtgctggaactgctgtggcccagg
tttgagcttatcctggagatgaacattcagagcatccgcaacacggatcctcaaaaactg
ggcgtgctggacaccagaccacattatatcacacgcagatatgcagagttctcttctgcc
atagttagcattaaccagacattcaccagcgagcgaacccacaccctccttggccaactt
caggttgaagtggagaactttgtcctgaagatggctgcagagttcccttcacgcagggac
cagctcatcttcctcatcaacaactacgacatgatgctcagtgtactcatggagagggca
gctgatgacagtaaagaggttgagggtttccaacagctcctccaggccaggagccaggag
tttattgaggagattctgtcctctccctttggtggcatgatagcatttgtgaaggagagc
gaggcgctgacggagaaagggcagctggatagactaaagaatgacgaagcccggatcacc
cagctggtcaggggtttctccagcacatggaaacagtctgtggaggctctgagtcaggac
gtcatgaggtccttcaccaacttcaagaacggcactggcatcattcagggagcgctcact
cagctgatccagtactaccatggcttccacaaggtactggcccagcccacctttcgcagc
ctggccgtgcgctctgagctcatcaacctgcaccacctcatggtcgaagtcaagaaacac
aagcccaacttctaa
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