KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373530
Entry
139373530         CDS       T10872                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocla03016]
    139373530
Enzymes [BR:ocla01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     139373530
Transfer RNA biogenesis [BR:ocla03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    139373530
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 Zn_finger_prot zf-CCCH zf_CCCH_4 DUF3408 ORF6C
Other DBs
NCBI-GeneID: 139373530
NCBI-ProteinID: XP_070970251
LinkDB
Position
18:complement(42576471..42603660)
AA seq 652 aa
METETTPNIPTESHGMNGTDKGRAAIKTQFLTTKEKFHELLDSGGKGPNDDKASDDAAPK
ETAEDSLEEPQEKKFKVDPDEQERTKKRNSKRMRGQNKSRPHMKPTSYDNRRLCPSIIQE
RETKCVYGDKCKFIHDVAEYMALKPADVGEHCYLYDTFGKCHYGLSCRFARAHISADLKN
LANEERVKAMEGRTPVRNSLDKDLQWRLRKKVVPFTASDAYMKTVFKGGHKAGEGWKKAA
TAENVDNCCSAVVNSQCSEGEKPQTTDNQGTEVSQENLALVKTIGPLTDADVIKLRQCEK
KQVDFKDKLYLAPLTTCGNLPFRRICKRFGADITCGEMAMCTNLLQGQSSEWALLKRHES
EDLFGVQVEGCFPDTMTRCAELLNNKIDVDFVDINSGCPIDLVYKKGGGCGLMTRTNKFE
QIIRGMNSVLDVPLTVKIRTGVQEKANIAHKLIPEMKKWGVSMITLHGRSREQRYTKSAD
WDYINTCSQLASPIPLFGNGDILSYYDAMKARETEVSGVMLARGALIKPWVFTEIKERRD
WDISSSERLDVLRDFTHYGLEHWGSDTQGLEKTRNFLLEWLSFMCRYIPVGLLEQVPQRI
NERPPYYMGRDYLESLMASQHVGDWIKISEMLLGPVPKNFNFLPKHKANAYK
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggagaccgagacaaccccaaatatacccacagaaagccatgggatgaatgggactgat
aaaggcagagctgccattaaaacccagtttctcacaaccaaagaaaagttccatgagtta
ctggactctggagggaagggtcctaacgatgacaaggccagtgacgatgcagcaccaaaa
gagacagcagaagactctctggaagagcctcaagagaaaaaatttaaagtggacccggat
gagcaggagaggacaaagaaacggaacagcaagcgaatgcgaggccagaacaagtctagg
ccgcatatgaaacccacgagctacgacaacagacgactgtgtccttccataattcaggag
cgtgagaccaaatgtgtctacggcgacaaatgcaagttcatccatgatgttgctgagtac
atggccttaaagcccgctgacgttggagagcactgctacctctatgacaccttcgggaag
tgccactacggcttgagctgccgattcgcccgggcccacatcagcgctgacctaaaaaac
ctggctaacgaggagcgtgtgaaagccatggaggggagaacacccgtgaggaatagcctg
gacaaggacctgcagtggcgcctccgcaagaaggtggtcccctttacagcgtctgacgcc
tacatgaagaccgttttcaaaggcggacacaaagcaggagagggctggaaaaaggctgca
acagcagagaacgttgataactgttgttcagcggtggtgaactctcagtgttctgaaggg
gagaaaccacaaacaacagacaaccagggaactgaggttagccaggagaacctggctcta
gtcaaaaccattgggccgttgactgatgctgatgttataaagttacgacaatgtgaaaag
aagcaggtggacttcaaagacaagctgtatcttgctcccttaacaacgtgtggaaacctg
cctttccgtcgtatatgcaaacgattcggcgccgacattacatgtggagagatggccatg
tgtaccaacctgctgcagggccagtcgtccgaatgggcgctcctcaagagacatgagagc
gaggaccttttcggcgtgcaggtggagggatgctttcctgacacaatgaccagatgtgca
gagctactcaacaacaaaatcgacgtggactttgtggacatcaactctgggtgtcctatt
gaccttgtatacaagaagggcggaggatgtgggctgatgacgcgcaccaacaagtttgag
caaatcatccgaggaatgaactctgttctggatgtccctttgactgtcaagattcgtacc
ggcgttcaggagaaggccaacatcgcacataaactcatcccagagatgaagaagtggggg
gtgtccatgatcacgttgcatggcaggtccagggaacagcgctatactaagtcagctgac
tgggactacatcaatacctgctcccaactcgccagccccatcccactctttggtaatgga
gacattttgtcttattatgacgccatgaaggctagagagactgaagtttcgggtgtaatg
ctggcaaggggcgcgctcatcaagccctgggttttcacagagatcaaggagaggcgggac
tgggacatctcgtccagcgagcggctggatgtccttagggacttcacccactacggcctg
gagcactggggctcggacacccaaggcctggagaagaccaggaacttcttgctggaatgg
ctgtccttcatgtgcaggtacataccagttgggctgctggaacaagtgccccagaggatc
aatgagcgaccaccctactacatgggcagggactacctggagtctctcatggcaagtcaa
cacgtaggggactggatcaagatcagtgaaatgctgcttggacctgtacccaagaatttc
aactttctgcccaagcataaggcaaatgcttacaaatga

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