Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373577
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Entry
139373577 CDS
T10872
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U-like isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139373577
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139373577
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139373577
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139373577
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Type II RPTP family
139373577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Ig_DSCAM-DSCAML_C
Y_phosphatase3
Pur_ac_phosph_N
SPG48
Motif
Other DBs
NCBI-GeneID:
139373577
NCBI-ProteinID:
XP_070970346
LinkDB
All DBs
Position
18:complement(46861993..47133742)
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AA seq
1497 aa
AA seq
DB search
MYSGVILLMLVVGIYTDTMDQGPTAGCTFDEDSNPGLCEYKQGQEDDFDWQLMRTYNWPH
TSPDLLRGSFMMVNSSQHAAGQRAHLLLHSLSENDTHCIQFSYFLYSRDGHSPGELLLYI
RVNGGPWGSAVWNVSGSHGRQWHQVELAVSTFWPSEYQVVFEASVSAERRGYIAIDDILL
LNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGKTTETEPFLLERRNGVVVAASSIQRLS
HKRLMATFQVEAERGEQDLYRCITESARGAAVSNFAELIVRVPPTPIAPPQLLRAGPTYL
IIQLNTNSIVGDGPVIRREIEYRASQSPWSETHGVGSLTYKVWHLEPDTEYRISVLLTRP
GEGGTGAPGPPLVSRTKCAEPMRALRGLTAIEIQPRQLVLQWEPLGYNLTRCHTYSVSLC
YRYSTPAGGSAGNNATVRECLSVERNQSHFTLRDLPPFRSVHVRLALENPEGKKEGREVT
FQTEEDIPGGIVPESLTFTPLDDMIFLKWEEPVEPNGVITQYEISYQGIESSDPGINVPG
PRRTVSKLRNETYHMFSGLHPGTTYLVSVRARTAKGFGQTALTEITTNISAPVFDYEDVP
APLSESESTITVLLRPALGRGAPVSAYQVVVVEEDGSRRIRRRRRRRELGSGSDCFPVPA
SQVEAQSKGTPHYYTAELPPSSLPEATPFTVGDNHTYNGYWNTPLDPSKNYLVFFQAISN
FRGETRMNCIRIARKAACKDHKRALEVSQHAEDMGLILGACAGGLVVLILLLGAIVIIIK
KGRDFYSYSYYPRKKVALNKAAMSYRQEKTRKLGSLDCSMTEQSTLQQDGRTANSFMDAH
TCNTRNEQRSSVNESSSLLGGSPRRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTGEG
YGFKQEYESFFDGWDVTKKKDKTKGRHDSLLGHDRHRVKLHSLLADPNSDYGNANYIDLL
LKLRLSHMISCGNQRYCRVTYDIRINREGYQRSNHFIATQGPKQEMIYDFWRMVWQENCF
SIVMITKLVEVGRMKCCKYWPEDSELYGDIKITLLKTETLAEYTVRTFSMERRGYPAKHE
VCQFHFTSWPEHGVPYHATGLLAFLRRVKASTPPDAGPVVVHCSMGAGRTGCYIVLDVML
DMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHDAILEACLCGETAIPVLEFALTYK
EMLRVDSQSNTSQLREEFQTLNSVTPHLDVEECSVSLLPRNREKNRSMDVLPPDRALAFL
VTTEGIAEGNNYINAALTDSFHRPAAFVVTPHPLPGTTADFWRLVYDYGCTSVVMLNQIN
QSNSAWVRRGEPCLKYWPEPGLQQFGPMTVELLSMTADDDVIIRLFRVQNIMRLQEGQLV
VRHFQFLRWSPYRDVPDSKKAFLSLLAQVHNWQRECGEGRTIVHCLNGGGRSGTFCACTM
LLEMIRHHSLVDVFYAAKTLRNSKPNMVETMEQYRFCYDLALEYLDALDCLSEIEVR
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcggagtgattctactgatgctggtcgtcgggatctacactgatactatggac
caagggccaacagctggctgtacctttgacgaggactccaaccctgggttgtgtgagtac
aagcagggacaggaggacgactttgactggcagctgatgaggacatacaactggccacac
acctccccagacctgctgcgaggctcgttcatgatggtgaactcgtcccagcatgctgcg
gggcagcgggcccacctcctcctccattcgctgagtgagaacgacacgcactgcatccag
ttcagctacttcctgtacagccgcgacggccactcccccggggagctgctgctctacatc
cgggtcaatggggggccgtggggcagtgccgtgtggaacgtctccgggtcacatggacgc
cagtggcaccaggtggagctagctgtcagcacattctggcccagcgaataccaggtggtg
tttgaagcatcggtctcagcagaacggcgaggctacatcgccattgacgacatcctgctg
ctcaattacccctgctacaaggttccccacttctctcggctgggggatgtggaggtcaat
gcagggcagaatgccaccttccagtgtgtcgccacgggcaaaactacagagacagaaccc
ttcctactggagcgtcgtaacggtgtggttgtggcggcgtcctctatccagcgtctgagc
cacaagcgtctcatggccaccttccaagtggaggctgagagaggggagcaggacctgtat
cgctgcatcacagagtccgcacgcggagctgccgtgtccaacttcgccgagctcattgtc
agagtgccccccacccccatcgctcccccccagctgctccgggctggccccacctacctg
atcattcaactcaacaccaactccatcgtgggggatggccctgttatccgccgtgagatc
gagtaccgggccagccaatcaccatggtcggagacacatggtgtgggctcgctcacgtat
aaggtgtggcatctggagccggacacagagtaccgtatcagtgttttactgacccgacca
ggggagggaggcacaggggcgcctggacctcccctggtcagcaggaccaagtgtgcagag
cctatgcgtgcgttgcgaggcctcacagccatagagatccagcctcgtcaactagtctta
cagtgggaacctctgggctacaacctgacgcgctgccacacctactccgtctctctctgc
taccgttactccacacctgcagggggcagcgcagggaacaatgccacagtgagggagtgt
ctctctgtagagaggaaccaatcacacttcaccctgagggacctgcccccgttccgctcc
gtccacgtccggctggcgctggaaaatccagaaggcaagaaagaaggcagagaggtcacc
tttcagaccgaggaggacattcctggtggcatcgtcccagagtcactaactttcacccca
ttagatgatatgatctttctgaagtgggaggagcctgtggagcccaatggggtcatcaca
cagtatgagatcagttaccagggcatcgagtcatccgacccgggtatcaacgtaccgggc
cctcgccgtactgtctccaagctgaggaacgagacataccacatgttctctggtctacac
cccggcaccacctacctggtgtctgttagagctcgcaccgccaagggcttcgggcagacc
gccctcactgagatcaccaccaacatctccgccccggtgtttgactatgaggatgtccca
gccccactcagtgagtcagagagtaccatcactgtgctgctgagacctgcgctgggcaga
ggagcaccagtcagtgcataccaggtggtggtagtagaagaggacggttctaggcggatc
aggaggaggaggaggaggagggagctgggtagcggttcagactgtttccctgtgccagcg
tcccaggtggaggcccagtctaaggggacgcctcactactacacagctgagctgcccccc
tccagtctccctgaggccactccgttcaccgtaggagacaaccacacctataacggctac
tggaacactcccctggacccctccaagaactacctagtcttcttccaggctataagcaac
ttcagaggggagacgagaatgaactgcatccggattgcccgtaaagctgcctgtaaggac
cataagagggccctggaggtgtcccaacatgcagaggacatgggtctgatcctgggggcc
tgtgctggcggactggtggtcctcattctgctgctgggagccatcgtcatcatcatcaag
aagggaagggacttctattcttactcttactaccccaggaagaaggtagcgctgaacaag
gcagccatgtcgtaccgtcaggagaagaccaggaagctaggttctctggactgcagcatg
acagagcagagcaccctgcagcaggatgggcgtactgctaactccttcatggacgcccac
acctgcaacacacggaacgaacagaggagttcagtgaacgagtccagcagcctgttgggt
ggttcccctcgacgccactgtcgtaggaagagctctccgtaccacacgggtcaacttcac
cccgcggtcagggtggcagacctcctccaacacatcaaccagatgaagactggggaggga
tacggcttcaaacaggagtacgagagcttctttgatggatgggatgtcaccaagaagaag
gacaagactaaagggagacatgacagtttgctggggcatgatcgtcatcgagtcaagcta
cactctctcctagcagaccccaactctgactatggcaatgccaactacatagacttgctc
cttaaactgagactcagccatatgatcagctgtgggaaccaaagatattgcagagtgact
tacgatatccggataaacagggaagggtaccagcgatcaaaccacttcatagccacccaa
ggtcccaagcaggagatgatctatgacttctggaggatggtgtggcaggagaattgcttc
agtattgtcatgatcactaaactggtggaggtgggcaggatgaagtgctgtaagtattgg
cccgaggacagtgaactctatggagacatcaagatcacactgctgaagacggaaacactg
gccgagtacaccgtccgcaccttttctatggagcggaggggctacccagcgaaacatgag
gtatgtcagttccacttcacctcctggccagagcatggtgttccctaccacgccacaggc
ctgctggccttcctacgccgggtcaaggcctccacaccccccgatgctgggcccgtggtc
gtccactgcagtatgggagcaggcagaacaggctgctacatcgtactggacgtcatgctg
gatatggcagagtgtgagggagtggtggacatctacaactgtgtcaagaccctctgctcc
agacgcatcaacatgatacagacagaggagcagtatgtgttcatccacgatgccattctg
gaggcctgtttgtgtggagagacagctatacctgttcttgagtttgctctgacctataag
gagatgctgagggttgactcacagagcaacacctcccagctacgagaggagttccagaca
ttgaactctgtgacccctcacctggacgtggaggagtgcagcgtatccctgttgccgagg
aaccgcgagaagaaccgtagcatggacgtcctgccccccgaccgcgccctggccttcctg
gtcaccactgagggcattgccgagggcaacaactacatcaacgccgctctcactgacagc
ttccaccggcccgccgccttcgtggtcacacctcacccgttaccgggaaccacggcagac
ttctggaggctggtctatgactatggatgtacctcagtggtgatgctcaaccagatcaac
cagtccaactctgcctgggtgagaagaggggagccgtgtctaaagtactggccagagcct
gggctgcagcagtttggaccaatgacagttgagctcctgtccatgacggctgacgatgac
gtcatcattcgtctgttccgggttcagaacatcatgcggctccaggaaggtcagctggtg
gttcgtcatttccagttcctgcgctggtctccataccgtgacgtcccagactctaagaag
gctttcctcagcctcctggcccaggtccacaactggcagagggagtgtggagagggacgt
accatcgtccactgtcttaacggtggtggtaggagtggtacgttctgtgcttgtaccatg
ctgctagagatgatccgtcatcacagcctggtggatgtcttctacgctgccaagacgcta
cgcaactccaaacccaacatggtggagaccatggagcagtaccggttctgctatgacctg
gccttggagtacctggacgccttggactgcctgagtgagatagaagtgagataa
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integrated database retrieval system
