Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373641
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Entry
139373641 CDS
T10872
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139373641
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
139373641
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
EGF
Plasmod_Pvs28
hEGF
EGF_LRP2
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
139373641
NCBI-ProteinID:
XP_070970473
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All DBs
Position
18:complement(50924005..50943655)
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AA seq
494 aa
AA seq
DB search
MIPSPPLFLLLLGLMGAHATAPVSVDLRTAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEF
EQVKVFLAKVIEGLDVGPDATRVGVVNYASRVKNELSLKTHKTKAGLVKAVTKIEPLSTG
TMTGLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDNVKDVAARARDAGIELYA
IGVGRVDLNTLKQIASEQLDDHVDYVESYSVIEKLTKKFQEAFCVADLCATGDHDCQQVC
ISAPGSFKCACKEGFSLLEDGKSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQII
DKLDVSETKAHVGLVQYSSSVKQEFPLGRYNNKKDLKDAVKKMAYMERGTMTGQALRYLT
DSSFAPAGGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEQGFRMYAVGVGNAVEDELREI
ASQPTGEHYFYTADFKAMTAIAKKLQINICQEEDPCECDSVVKFQKKVEEALQALTKKLE
GVSKRIAALENKIV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgataccctctccgccattgttcctgttgctgctcggcctcatgggagcgcatgccacc
gctcccgtgtccgtggacctccgcaccgctgccgccatggcggcaggtctgtgtaacact
cgccctacagacctggtgttcatcgtggacagcagtaggagcgtgcgtccgtcagagttc
gagcaggtcaaggtgttcctggccaaggtcatcgagggactggatgttggacctgacgca
acacgggtcggagtggtcaactatgccagccgcgtcaagaatgagctgtctctgaagacc
cataaaaccaaggcaggtctggtaaaggctgtgactaagatcgagcccctgtccactggc
accatgaccggccttgctatccagttcgccctcaacgtagctttcagcgaggctgagggc
gcccgcgtcaagtccccagacatcagcaaggtggccatcattgtgacagacggtcgtccc
caggacaacgtaaaggatgtggcggcgcgtgcccgggatgcgggtatcgagctatacgcc
attggcgtagggcgtgtagacctgaatacgctgaagcagatcgccagcgagcagctggac
gaccacgtggactacgtagagagctactcagtcatcgagaaactcaccaagaagttccag
gaggctttctgtgtggcggacctgtgtgccactggagatcatgactgtcagcaggtatgc
atcagcgcaccagggtcattcaagtgtgcctgcaaggagggcttcagtctactggaggat
ggcaaaagctgcagcgcctgcagtaatgccgccacagacgtggtgttcctgatcgatggt
tctaagagtgtgcgtccagagaactttgagctggtcaagaagtggatcaaccagatcata
gacaaactggacgtctccgagaccaaggctcatgttggactggtccagtactccagctct
gtcaaacaggagttccctctgggacgttacaacaacaagaaggacctgaaggacgcagtg
aagaagatggcctacatggagagggggaccatgacaggacaggccctgcgctacctgacc
gacagcagctttgcaccagccggtggggcacggcccggggtcgccaaagtcggcattgtg
ttcaccgatggacgcagccaggactacattggagacgccgccaagaaggccaaggagcaa
ggttttaggatgtatgctgtgggcgtgggtaatgctgtagaggatgagttgagggagata
gcatcacagccaacaggagaacactacttctacactgcagacttcaaagccatgacagcc
atcgctaagaagctgcagatcaacatctgtcaagaggaagacccatgtgaatgtgactct
gtcgttaagttccagaaaaaagtagaagaagccttacaggcactaacgaaaaaactggag
ggtgtgtcgaagaggatcgctgcgctggagaacaagattgtctga
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