Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373651
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Entry
139373651 CDS
T10872
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
ocla03272
Virion - Hepatitis viruses
ocla04144
Endocytosis
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
139373651
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139373651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139373651
NCBI-ProteinID:
XP_070970498
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Position
18:complement(51166234..51192834)
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AA seq
887 aa
AA seq
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MATFISVPLKKSSEVELVKPLSKFVTATYPTGEDQAEYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNGAALASQIASEQNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAIIAKLANQAADFYSDAFKQCQYKENLPKCI
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKHFGEEIARLQHASELVKTVASRYDEYVS
VKDLSDKISRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATTITPPLSAKFTDLFE
KMVPMAVQQSMSVYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IIEKAHAIVQQGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEESTDSELRSKFSQRW
NRTPSVDLYKPLRAEGGNFRSVLDKAVQADQVVRERYNAHCEMIALLCKPEAELTAAIPS
ANPAKTLQGSEVVSVLRSQLSQLEVVKREREGLETEIKGVTFDMSSSFLTALAQDGAINE
EALSMSQLDQSYGSYSQRVQASLRSQEELLGNVQASHQEFSSLKQSNSEANDREEVLKKL
ASAHDSYVEITSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFSVPAYQTNPTPTATGPTPAPRTVFQPQQPQAKAQPPERPPPPAFTPQAASAPGN
PPSNQPQPVNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYGQYNMPPAMQPN
MQPYVPYQQAPAPGQGGYPGVPPTQQHPYTYQQQPQQPPPQPYYPQQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttctgtcccgttaaagaagtcgtctgaagtcgaactagttaaaccg
ctctcgaaattcgttacggcgacatacccaacgggcgaggatcaagctgagtatatccga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctcgacaaacac
gaaagctcgctggaaatcctcctgaggtattatgatcagctgtgtgccgtggagccaaag
tttcccttctctgaaaaccagctgtgtctaaccttcacatggaaagatgcctttgataag
ggctcactgttcgggggctcagtcaaactagccctggccagtctgggctatgagaagaca
tgtgtgttgttcaatggagcagcgttggcaagtcagatcgcttcagaacaaaacctggac
agcgatgaaggactgaaggccgcagccaaatactaccagttggcaagtggagcatttggt
cacattaaggacacagtgctgtcggctctaaacagagagcctacaatggacatttctcct
gagaccgtaggaaccctcagtctcatcatgctggctcaggcacaggaagtcttctttctc
aaggctacttcagataagatgaaggacgccatcatcgctaaactggccaatcaggcggca
gatttctacagcgatgccttcaagcagtgtcagtacaaagagaacctgcccaagtgtatt
tatttccaggaggtgttgccggtgctggcagctaaacactgcatcatgcaggccaacgct
gagctacaccagtctatcctcgccaagcagaagaaacactttggggaggagatcgctcgc
ctgcagcatgcttcagagctggtgaagacggtagcgtctcgctatgatgagtacgtcagt
gtgaaagaccttagtgataagatcagccgtgctctgaccgcagctaagaaggacaacgac
ttcatctaccacgaccgcgtccctgaggtcaaagacctggaacacatcggcaaggcagcg
ctggtcaaggctaccaccatcacacctccgctcagcgccaagttcactgacttgtttgag
aagatggtgcccatggctgtgcagcagagtatgagtgtgtacagccagaggaaggctgag
accgtcaacagactggtaggaaccatgagggaagctactaacctctgcaacggtgtcctg
gcatctctgaacctgcctgcggctctggaggacctgtctggagattctatcccacaatcc
attattgaaaaggcccatgccatcgtccagcagggggggctgcagagcatagagcagctg
atcagagacctgccggaactactgacacgcaacagagagatcctggatgagtctctgaag
atgctggatgatgaggagtcgacagacagcgagctgagatccaagttcagccaacgctgg
aacagaactccctctgtagacctctacaaaccactcagagcggaggggggtaacttccgt
agcgtgttggacaaggcagtgcaggctgaccaggtggtcagggagcgttataatgcacac
tgtgagatgatcgctctcctctgtaaacctgaggctgaactcaccgctgccataccttca
gccaaccctgctaagacattgcagggcagcgaggttgtgagtgtgttgcgttcccagctg
tcccagctagaggtggtgaagagagagagggaggggctggagacggagattaagggcgtg
acctttgacatgtcctccagcttcctgacggctctggctcaggacggggccatcaatgag
gaggcactgtcaatgagccagctggaccaatcatacggcagctacagccagagggttcaa
gccagcctccgctctcaggaagagctgttgggcaacgtgcaggcatctcaccaggagttc
tccagtctgaagcagtccaactcggaggctaatgatcgtgaggaggtgttgaagaagctg
gcctcggcccacgacagctacgttgagatcaccagcaacctcagagagggcaccaagttc
tacaatgacctcaccgagatcctgctgaagttccagaacaagtgcagtgacatcgtcttc
gcccgcaagacagaacgggatgaactgctgaaggatttgcagcagagcatcgccagggag
cccagtgccccgtccttctctgtccccgcctaccagactaaccccacccccaccgccact
ggaccaacccccgcaccaaggactgtcttccagcctcagcagccccaggcgaaggcccag
cctcccgagcggccccctccccctgccttcaccccccaggccgcctccgcaccaggcaac
cctcccagtaaccagcctcaaccagtaaaccccccacctatggcccctccctcacaggcc
cagggaccgccttaccccacataccagggataccccgggtatgcctaccagatgcctatg
ggttataacccgtatgcagcgtacggccagtacaacatgccccctgctatgcagcctaac
atgcagccctacgtcccctatcagcaggccccagcacccggacaggggggctaccctggg
gtcccccccacacagcagcacccctacacctaccaacagcagccccagcaaccaccacca
cagccatactacccacaacaataa
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