Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373662
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Entry
139373662 CDS
T10872
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139373662
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139373662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139373662
NCBI-ProteinID:
XP_070970576
LinkDB
All DBs
Position
18:51627229..51653833
Genome browser
AA seq
1446 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNSQFREGLDPNASYGETYQHNTPLHYTCRHAMTR
LLRSFLFSKEGNPNKRNVQNETCLHALCQGAHILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLDRGQYERVNINATDNRNSTCLHYAAAAGMKSCVELLVQAGSDLFVEDEEK
LTPCDHAERQQHTHLALRLEAMMVFSQHTHTETQTPSSTLRHKEPYEGLKLQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDSEECCQRSGVLMPTPPPSGCNAW
DTLPSPRTPRSPLTLTLTSLTDSCLTPGEEGGTTCGICLCSISVFEDPIDMSCGHEFCRA
CWEGFLNVKIQEGEAHNIFCPACDCYQLVPVQVIESVVSREMDKRYLQFDIKAFVENNPS
IRWCPAVRCERAVRLTRPGPGVNHLGFPLLPSPAVDCGKGHLFCWECLGEAHEPCDCQTW
RMWLQKVSEMKPEELAGVSESYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVITQLEEQSKEMTGEAEKKHKSFQELDRFMHY
YSRYKNHEHSYKLEQRLLKTAKEKMEQLSRAFIGCEGSPPDTRFIEDGVCELLKTRRVLK
CSYPYGFFLQPHSTQKEIFELMQTDLEMAVEDLAQKVNRPYLRTPCHKIVSAACLVQQKR
EEFLASVARGVAPNDSPEVPRRSFPAGSWDWEYLGFTSPEEYADFQYRRRHRPRRRGDMP
SLHSLRSNSSTPEPNQNPENTEVLQERVEGRRQPLRSLDEDDPNILLAIQLSLQDSRRER
EMERGMGGGLERGSGVIEGPGLGSGQGLDIGPVMGPGVGSLSETQDPSSVGGSLGASGSS
NLPRPDPNQSLNAELLELGESLMRLGQITTPYTLDNTNIPTPYSLDHTYDHYNPSPRYSQ
SQDLSYTSYTTDHSYAVLEPDLSTPYTHGYGHTCDHNQDHTTINIPFTPEHDHNCGQNQN
RGHPTINAFYSSVHCQPSLYTKTSPSHTDLTASSSPKHTILYPSDPEPYAMFSLPHNPEP
DQTISCTQDTHPDQNHHHCCHSSHYTPNPDPYTPNPDPYTPNPDHYTPNPDSYTPNPDHY
TPNTDPYTPNPDPYTPNPDHYTPNPDPYTPNPDHYTPNPDSYTPNPDPYNPNPDHYNPNP
DPYNPNLDPYTPNPDYTSNPDPCRTSSDPHGLLLPSPDPELVSPVVPPGGPFTPSDPGCL
ERLDPSAEALLLDNIMAWIQHTHPQDSPQNINLIPSASSETGSPPEKYSPPDTETDSPTV
SLQDGGDPKSDSPPDAQASFSGEALAELRQGEAGRGQAGSPGPGDSLEVKRPSTLDLECC
EGEEYVECVVTGFVSDLSQDALDTHIHSHTHCGDDNLTPTKTDSSPTAWVVEDQSRPEWE
EQVHLV
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccactaagttccggaaggctctagtcagcggggacgaggcgttggca
tggcaactgtacgagggcaacagccagttcagagaggggctggaccccaacgcgtcctac
ggagagacctaccaacacaacacacccctccactacacctgcaggcacgccatgacacgc
ctgctcaggtcattccttttcagtaaagaagggaaccctaacaagcggaacgtgcagaat
gagacatgtctgcatgcgttgtgtcagggagcgcacatcctgcttctgccagagggggca
ctgtctcccagactggccagaccacagagagacgaacagcgcagggcagactgcctacag
atgatcctgagctggaccggggctaggctggacagaggacagtatgaaagggttaacatt
aatgctacagacaacaggaacagcacctgtctacactacgctgctgctgctggcatgaag
agctgtgtagagctcctggtccaggctgggtcagacctgtttgtggaggacgaggagaag
ttaaccccgtgtgaccacgcagagagacagcagcacacacacctggccctgcgcctcgaa
gccatgatggtgttctcacaacacacacacaccgagacacagacacccagcagcacgctg
cgccataaagagccctatgagggtttgaagctgcaggacttgaggagactgaaggacatg
ttgatagtggagacagctgacatgctgcaggctcctctcttcaccgctgaggcactgctc
agagcacacgactgggacagagagaagcttttggaagcctggatgagtgattctgaggag
tgctgccagcggtctggggtcttgatgcccacacccccgcctagcgggtgcaatgcctgg
gacaccctgccttccccgcgcacccctcgctcccccctcaccctaaccctcacgtccctc
actgacagctgcctcaccccaggggaggagggagggactacgtgtgggatctgcctgtgt
tccatctcagtgtttgaagacccaatagacatgtcctgtggtcatgagttctgccgagcc
tgctgggaagggtttctgaatgtgaagatccaggagggtgaggctcataacatcttctgt
cctgcctgtgactgttaccagctggtgcctgttcaggttatagagagtgttgtctccaga
gagatggacaaacgatacctgcagtttgacatcaaggcgttcgtggagaacaacccatct
attcggtggtgcccggcagtgcggtgtgagagagcggtcagactgaccaggcctggtccg
ggggtcaaccacctggggttccccctgctgccctcccctgcagtcgactgtggcaagggt
cacctcttctgctgggagtgtctaggtgaggcccatgagccatgcgactgtcagacatgg
aggatgtggctgcagaaagtctcagagatgaagccagaagagttggcaggtgtatcggag
tcgtatgaggatgcagctaactgtctgtggttgttaaccaactctaaaccctgtgccaac
tgcaagtctcccatacagaagaatgagggctgcaaccacatgcagtgtgccaagtgtaag
tatgacttctgctggatctgtctggaagagtggaagaaacacagctcttcaactggagga
tactaccgctgtacacgctatgaggtcatcacgcagctagaggagcagtccaaagagatg
actggagaggcggaaaagaagcacaagagttttcaggagttggaccgcttcatgcactac
tacagccgctataagaaccatgaacacagctataagttagaacagagactattgaaaaca
gccaaagagaagatggaacagctgagtagagccttcattggatgtgagggctccccccca
gacaccagatttatagaggacggtgtgtgtgagttgttgaagacacgtcgtgtgttgaag
tgttcctacccctacggattcttcctccagcctcacagcacacagaaggagatatttgaa
ctcatgcagactgatctggagatggcggtggaggacttggctcagaaggtgaaccgtccc
tacctgcgtacgccgtgtcataagatagtcagcgctgcctgtctggtacagcagaagaga
gaggagttcctggcctcggtggctagaggggtggcccctaacgactcacctgaagtacct
aggaggagtttccctgctggatcatgggactgggagtacctgggattcacctctcctgag
gagtatgctgatttccagtaccggcggagacaccggccgcgtcgtagaggagacatgccg
agtttacacagtctgaggagcaacagcagtactcctgagcccaaccagaaccctgagaat
acagaggtcctccaggagagagttgaggggcggagacagcctctgaggtcactggatgaa
gatgaccccaacattctactggccatccaactgtcactacaggactcacggagggagaga
gaaatggagagagggatgggaggaggactggaaagaggctctggtgtgattgagggccca
gggcttgggtctggacagggtctggatatagggccagtaatgggtccaggggtggggagc
ctcagtgagactcaggacccctccagtgtgggtggttctctgggggccagtggctcctct
aacctccctagaccagaccctaaccagtcgctaaatgctgagctgttagagctaggagaa
agtctgatgagactgggacaaataactactccatataccctagacaacactaatatccct
acgccatatagcttagatcacacctacgaccactacaacccttcccccaggtacagtcag
agtcaggaccttagctacacatcttatacaactgaccacagctatgctgttctggaacct
gacctcagcacaccttatacacacggctacggtcacacctgtgatcataaccaggaccat
accactatcaacattcccttcactccagaacacgaccataattgtggtcaaaaccaaaac
cgtggccatcccactatcaatgccttctacagttctgttcactgccaacccagcctctac
actaaaacatctccttctcacacagaccttacagcatcttctagccctaaacacacaatc
ctttacccctcagacccagagccatatgctatgttcagccttccccataaccctgaacca
gaccaaaccatatcttgcacccaggacacacatcctgaccagaaccaccaccattgctgc
cactccagccactacacccctaacccagacccttacacccctaacccagacccttacacc
cctaacccagaccattacacccctaatccagactcttacacccctaacccagaccattac
acccctaacacagacccttacacccctaacccagacccttacacccctaacccagaccat
tacacccctaacccagacccttacacccctaacccagaccattacacccctaacccagac
tcttacacccctaacccagacccttacaaccctaacccagaccattacaaccctaaccca
gacccttacaaccctaacctggacccttacacccctaacccagactacacctcgaatcct
gacccatgccgcacttcctcagacccccacggcctcctgctcccctccccagacccagaa
ctcgtctccccagtggtccctccaggtggtcccttcacccccagtgacccgggctgcctg
gagcgcctggacccctcagctgaagccctgctcctggacaacatcatggcctggatccaa
cacacacacccccaggacagcccccagaacatcaacctcatcccctcagctagctccgag
actggctcacccccggagaaatactcacctccggacacagagacagactcacccactgtt
tcactccaagatggtggggacccaaagagtgattcccctcctgacgcccaggccagtttc
agtggggaggccctagccgagctacggcagggagaggcgggtaggggacaggctggctcc
cccggccctggagacagcctggaggttaaaagacccagcactctggatctggagtgttgt
gagggtgaggagtatgtggagtgtgtagtcacagggtttgtgtcggacctgtcgcaggac
gcattggacacacacatacactcacacacacactgtggagatgacaacctcactcctacc
aagacagactcaagccccaccgcctgggtagtggaggaccaatcacgcccggagtgggaa
gagcaagttcacctggtgtga
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integrated database retrieval system
