Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373663
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Entry
139373663 CDS
T10872
Name
(RefSeq) class E basic helix-loop-helix protein 41-like
KO
K03730
class B basic helix-loop-helix protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139373663
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139373663
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
139373663
NCBI-ProteinID:
XP_070970581
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Position
2:complement(75353434..75357570)
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AA seq
433 aa
AA seq
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MDEKISRLQDRQFMDHADFLGVEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQEILAFQNGDLSM
KVPIRADLDAFHSGFQACAKEVLQYLNKLENWNACEQRCAQLISHLHKVSAQFQPGTPLL
HPQLPARDALDRDGQKPDSQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKNDGKKGC
DRSKLQGPKAVKIKQEFEDDRAAKKTKMNWAGNCTTSADMTTRPDLVFMNSLMGITGVGQ
QTPFCMPFYFINPSAAASYMPLFDKSNLEKFVYPAAAAATISSQFHWLYPSLNSHASAAA
AATAGVFSRMSTEKISGFGSDSKDSPSDDSDMSNVAEPGSPDEREDNLENDEDDDYDDKE
LGDESPDNEIDST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaatatcgcgtctgcaggacaggcaatttatggatcatgctgatttctta
ggggtggaatactcctcactctacatgtgtaaatcgaaaagagggctgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgagtgtatcggacagttaaaggatttgttacccgaacatctcaaactgacaacgctc
gggcatttggagaaagcagttgttcttgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcagcagcaccaggagattctggcttttcagaatggggatctatcgatg
aaagtgcccattcgcgctgatttggatgcgttccactcggggttccaagcgtgtgccaaa
gaggtcctgcagtacctaaacaagttggagaactggaatgcatgtgagcagcggtgcgcg
caactaatcagccacttgcacaaagtctcggcgcagtttcagcctggtacgccactgctc
catccccagctacctgccagagacgcgctcgaccgcgatggccaaaaaccagacagccaa
gccggacatgaccgcgtatcagtcatacagagaagccatggagagcttaacgagaatgac
acagacacagacagtggatatgggggtgaggcggaaaagaatgatgggaagaaaggatgt
gaccggagcaaactgcaggggcccaaggcagtaaagataaagcaggagttcgaggatgac
cgcgctgccaaaaaaacaaagatgaactgggctggaaactgcacgacaagcgcagacatg
accaccagacctgatctggtctttatgaattcgttgatgggaataactggcgtgggacaa
cagactcccttttgcatgcccttttacttcataaatccctcggcggcagcgtcctacatg
cctctatttgataaaagtaacctagagaagtttgtgtacccagctgcggcagcggccacg
atctcatctcagtttcactggttataccccagcctcaactcacatgcgtcggcagctgcg
gccgcaacagccggtgttttttcccgcatgtcgacagagaagatctctggattcggttcc
gattccaaagactctccctccgacgacagtgacatgtcaaacgtggcggagccgggctca
cctgatgagagggaggacaatcttgagaatgatgaagatgatgattatgatgataaggaa
ttaggggatgagtccccagacaatgaaatcgacagtacataa
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