Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373670
Help
Entry
139373670 CDS
T10872
Name
(RefSeq) integrin beta-8
KO
K06591
integrin beta 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04514
Cell adhesion molecules
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139373670
04514 Cell adhesion molecules
139373670
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139373670
09142 Cell motility
04820 Cytoskeleton in muscle cells
139373670
04810 Regulation of actin cytoskeleton
139373670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139373670
04515 Cell adhesion molecules [BR:
ocla04515
]
139373670
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139373670
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin beta subunits
139373670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
139373670
NCBI-ProteinID:
XP_070970603
LinkDB
All DBs
Position
18:51944097..51963644
Genome browser
AA seq
852 aa
AA seq
DB search
MTSWLHKYGYPTLHCVLLCVVLAANIIGGSSHSGERVCSSPPVSLCSECLRRGPQCAWCF
EAGFLDGAEVGERCDLVGNLARRGCGLEFIEHPEVMVEVNATISSTQVSPGEITLTLRPG
AEASVIVAVQQLERYPVDLYYLVDVSASMQENLDQLKTVGVALSHRMREHSSDLRLGFGS
FVDKPVSPYINVHPSKINNPCSDYEVKCRPAHGFHHVLSMTANMSEFTRIIKRQRISGNM
DTPEGGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLE
NNVYMESTTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPKL
IDVVVDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSVSHDNRSCSNVQPNQTVYF
NITIGLHSCPDDDDDDVVQVFVRPVGYNESSIIKVHSRCRCHCGPDWHCHDDTTHQSTCG
EVTPDTDRNNQDMNNRDMHTHTPDLDPEHTPTRPHTHTPDLDPEHTPTRSHTHIPDLDPE
HTPTRPHTHVPEWSRQCRAEGSGVDCNGRGVCVCGKCVCERNSLGTVYGQYCQMDDYSCP
YQHGLLCGGRGICVSGDCVCEEGWTGESCRCPVSTAICLSDNGLLCSGRGRCVCGRCVCD
NHQYSGAFCERCPTCHSSCQSHWRCIDCHLSHGLSQREAGECNHTCIPLVGYINDVTVLL
GQVWRQCVYKKDNCYYRFHTALVSGNTLLHFNTQPECVSSRRYVGTFLSVCVLTFLPGLV
MLAVLVLLLHRRSLPQGGATDQQYNPTGKDLSHVPKTNEKTVSYRRDRPPGPDRPMEMHI
TVPKMPLGEPWQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacataaatacggttacccgactctgcattgcgtgctgctctgcgtg
gtattggccgctaacatcatcggcgggagctctcattccggtgagcgtgtatgttcgtct
cctcctgtctcgttgtgttcagagtgcctccgacgcggaccacagtgtgcctggtgcttt
gaggcgggtttcctggatggagcggaggtgggagagcgctgcgacctggtggggaacctg
gcaaggagggggtgtggcctagagttcatagagcatccagaggtcatggtggaggtcaat
gctacgatcagcagcactcaggtgtcaccgggagagatcaccctcacactcagaccaggt
gctgaggccagtgtgatagtagcagtacaacagttagagaggtatcctgttgatctatac
tacctggtggacgtatcagcatccatgcaggaaaacctggaccagctgaagacggtgggc
gtagccttgtcccaccgtatgagagaacattccagtgatttgcgtctggggttcggctcc
ttcgttgacaaacctgtctccccctacatcaatgtacacccctctaagataaataacccc
tgcagtgactatgaggtgaagtgtcgcccagcccatggcttccaccacgttcttagtatg
acggccaacatgtccgagtttacacgcatcatcaagagacagaggatatcaggcaacatg
gacacaccagagggagggttagacgctatgctccaagctactgtatgtcagggtgaggtg
ggttggcgtggggaggccaagcgtctgttgttgttgatgacagaccagccttctcacctg
gcgttggacagcagactggctggtatagtcacaccccacgatggcctctgtcatctggag
aacaacgtctatatggagagcactaccatggaccatcccagtttaggcctgttggctgag
aagcttctagagaaccacatctactctctctttgctgtggaacaactacaatatcagtgg
tatgaggagttggtcaggttgctaccgggctccaatcttctgttccaggctcccaaactt
atagacgtggtggtggatgcatacaagaggttgttgtcagttgtccaggtgtctgtgtca
gtggaggacagagcattcagccgtttcctggtcagcgtctctcctctctgtccggaagga
tctgtatcccacgacaaccgcagctgctccaacgtccagcccaaccagacggtctacttc
aacatcaccatcggtctgcactcctgtcctgacgatgatgatgatgacgtggtccaggtc
ttcgtcaggcccgtgggttacaatgagtcatccatcatcaaggttcactcacgatgtcgc
tgtcactgtggaccggactggcattgccacgacgataccacacatcagtcaacgtgtggt
gaggtcaccccagatacagaccgtaataatcaagacatgaacaatcgggacatgcacaca
cacacaccggacctagacccagagcacacacccacacgccctcacacacacacaccggac
ctagacccagagcacacacccacacgctctcacacacacataccggacctagacccagag
cacacacccacacgccctcacacacacgtaccagagtggtcacggcagtgtcgtgcagag
ggatcgggggtggactgtaacggtcggggagtgtgtgtgtgtgggaagtgtgtgtgtgag
aggaacagtctaggaacagtgtatggacagtactgtcagatggacgactactcctgcccc
taccaacacggactactgtgtggagggcgaggtatatgtgtgtctggtgattgtgtatgt
gaagagggctggacaggagagagctgcaggtgcccagtctctacggcaatctgcctgtcc
gacaacgggttgctatgcagcgggcgtggcaggtgtgtgtgtggcagatgtgtgtgtgac
aaccatcaatattccggagcattttgtgagagatgtcccacctgccacagctcctgtcag
tcacactggaggtgtatagactgtcacttgtctcacggtctgtctcagagagaggctggg
gagtgcaaccatacctgcatcccattagtgggttacatcaatgacgtcacagtcctacta
ggccaggtatggagacagtgtgtgtataagaaagacaactgttactatcgcttccacact
gcacttgtctcaggaaatactcttctacatttcaacacacaacctgagtgtgtatccagt
aggcggtatgtggggaccttcctcagtgtgtgtgtgttgacgttcctccctggcttggtg
atgctggctgtgctggtgctgctgctgcacagacgatctttgccacagggtggcgccact
gatcaacaatacaaccccactggcaaggatctgtcacacgtcccaaagaccaatgagaag
acggtatcctacaggagggaccgccccccgggccctgaccgaccaatggagatgcatatc
accgttcccaagatgcccctgggcgaaccctggcagtaa
DBGET
integrated database retrieval system
