Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373694
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Entry
139373694 CDS
T10872
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139373694
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139373694
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139373694
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
139373694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
SHE3
Motif
Other DBs
NCBI-GeneID:
139373694
NCBI-ProteinID:
XP_070970649
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All DBs
Position
18:53094123..53248280
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AA seq
1069 aa
AA seq
DB search
MTRATAHCWHQAMELSRRLHWIRNRPWRARARHREFNRVSSRVPEIMAAGTHSPGGPNGI
IRSQSFAGFSTLQERRSRCNSFMGNSAVQKKPTSKPKKPHLSGHKASSGSREPQPKRVEE
VYGALKQGLDEYLEVYQTELDKLTSLMKDMKRNSRLGVLYDLDKQIKTIERYMRRLEFHM
SKVDELYEVFCIQRMLREGASKMKQAFSASPSTKATRESILEVNRRYKEYTENMSTFEVE
LENLLGEFHIKMKGLAGFARLCSGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFT
PLITDLINIKVTELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWF
PFDVEDLTLSSGNVSKATALQRRVSVYSQGTPETPTFQDQSFFSTLPDDVFENGGCGNSE
CKRLSFTFSDTSVSSLSPSLAPGQSNPEITVTPPDTNHWPQIPPREDKGVEEMVRVHADV
VEEEGEEEEESGDSGGSVSVSLVSEEVESEWERAEFQLNVGSSSLCSESQLSAVAPEDVF
LDHAGSDRDGDEDDSSELLKPVELDTEEPGNLTRQLVRRLTSSDILPEVVGLSWAGEGSR
AFLESSLEEALHSLLLRLESLGQRCRELQDLEQEVMRLEDLLKCRLPGHRSRSSSLSLTV
ESALESFDFLNTSDFDDDDTGDDHALHHSVFFDMEVERIGPGGQHPEARGHLSEALTEDT
GVGNSVAGSPLPLTTGNENLDMAIVIHLQYCDHLIQLLSSGGSPWQRRAQLQKLSAQTQL
LEELGEISTECLGSITSAADVLPGLAERPGLMALWSECSGSGGQFHTTLDRVLKHMHHSY
TSPLQERHPHTTAETVIWLVVSEMVDRSELASPPPSALSQDVLTVFQFHSYVSEHSVGDM
KEHLLQVAREAVFAEVLSGGDSERCLKELEEVSHTSLCPQLQTLRALASLLSHKDPQLSK
AATAYITSAASHTPFRSKAVDCYTQSLSEGGVLTQRSACAALGCLQAVESIRAVVLLCDS
ADEELHHIAIETLLTLGEEGRLAYEQLDTVPRELVQLGTRRGTAVTTAF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgccacagcacactgctggcaccaggccatggaactgtctcggcggctgcac
tggatccgtaaccggccctggagggcccgggcccgccacagggagttcaacagagtgtcg
tcccgcgtcccagagatcatggcggctggaacccactcccccgggggacccaatgggatc
atccggagccagtccttcgccggcttcagcacgctacaggaaagacgctcgcggtgtaac
tcgttcatggggaactctgcggtgcagaagaagcccacatccaagcccaagaagccccat
ctgtcagggcacaaggccagcagtggctccagagagccccagcccaagagggtggaggag
gtgtacggggccctcaaacaaggcctggatgagtatctggaggtataccagactgagctt
gataaactcacctctctgatgaaggacatgaagaggaactccagactgggagtcctgtac
gatcttgacaagcaaatcaaaaccatcgagaggtatatgaggcggttggagtttcatatg
agcaaggtggatgagttgtatgaggtgttctgtatccagaggatgctgagagagggagcc
agtaagatgaagcaggccttctctgcctctccctccaccaaggccaccagagagagcata
ttagaggtcaaccgcagatacaaggagtacacagagaatatgagcacgtttgaggtggag
ctggagaacttgttgggggaattccatatcaaaatgaaaggtcttgctggctttgctcgt
ctgtgttcaggagatcagtatgagatcttcatgcggtatggtcgtcagcgctggaagctg
aaagggaagatagaggtgaactccagacagagttgggacggagaagagatggtcttcacg
cccctcatcacagacctcatcaacatcaaagttaccgagctgaagggtttagccactcac
atcctagtgggcagtgtgatctgtgagaccaaggacctgttcacggccatgcctcaggtg
gtggctgttgatgtcaacgacctgggaacaatcaaactcaatctggaggtcacatggttt
ccgttcgatgtggaggacctgactctgtcttcaggcaacgtgagcaaggccaccgccctg
cagagacgggtgtctgtctacagccagggcacgccagagacacccaccttccaggaccag
tccttcttttccaccctccctgatgacgtctttgagaatggtgggtgtggcaactctgag
tgcaagcgcctctccttcaccttttccgatacatcagtctcctccctcagcccaagcctc
gccccaggccagtccaaccccgaaatcactgtcacgccgcctgacacgaaccattggcct
caaataccccccagggaagacaaaggggtagaagagatggttcgggtgcatgcagacgta
gtggaagaggagggtgaggaggaagaggagagtggtgacagcggcggtagcgtgagtgtt
agtctggtcagcgaggaagtggagtcagagtgggagagggcagagttccagcttaatgta
ggttcctcctctctctgctccgagagccagttgtcagctgtggctcctgaagatgtgttc
ctggaccacgctgggtctgacagggatggagatgaggacgacagctcggagctgctgaaa
cctgtggaactggacactgaagaaccaggcaacttgaccaggcaactggtgaggaggctg
acgtcgtccgacattctgcccgaggtggtgggtttgagctgggccggggagggaagcagg
gccttcctggagagcagcctggaagaggccctgcacagcctgctgctgaggctggaatca
ctgggacaacgctgtagagagctgcaggacctggaacaggaagtgatgcgcctggaggac
ctgctcaagtgtcgtctcccgggccacaggagcaggtcgtccagtctcagcctgacggtt
gagagcgctctggagagctttgacttcctcaacacctccgacttcgacgacgatgacacg
ggtgatgaccacgccctccaccactctgtgttctttgacatggaggtggagaggattggg
cctggaggccagcacccagaggccaggggccacctgagtgaagccctgacggaggacacc
ggggtgggcaacagtgtggccggcagccccctgcctctcaccactggcaatgagaatctg
gacatggccatcgtcattcatctgcagtactgcgatcatctcatccagctactgtccagt
ggagggagcccttggcagcgtagagcccagctccagaagctctcagctcagactcagctg
ctagaggaactgggagagatcagcacagaatgcctggggagcatcacctcggctgctgac
gtgctcccagggctggcagagcggccagggctgatggctctgtggtcagagtgtagtggt
tctggaggacagtttcacactacgctggaccgggtgcttaaacacatgcaccacagctac
accagtccactgcaggagaggcacccacacaccacagctgaaacagtgatctggctggtg
gtgagtgagatggtggacaggagtgaactggcctcccctcctccctcggccctgtcccag
gacgtcctcacagttttccaattccacagctacgtctcagagcacagtgttggggacatg
aaggaacacctactgcaggtggctagagaggctgtgtttgcggaagtcctgagcggcggc
gactcggagcgttgtctaaaggaattagaagaggtgtcacacaccagcctgtgtccccag
ttgcagactctcagggccctggcctccctcctctcccacaaagacccccagctcagcaag
gccgcaactgcctacatcacttccgctgcctctcacacaccctttaggtcaaaggcggtg
gactgctacacacagtccttgtcggaggggggagttctaacgcaaaggtctgcctgcgct
gctctcggttgtctacaggcggtagagagtattcgagcggtggtgttgctgtgtgactcg
gcagacgaggagcttcaccacattgccatagaaaccctgctcaccttgggagaggagggg
cgtctggcgtatgagcagctggacacggtgcccagggagctggtacaactggggacaagg
cgagggaccgctgtcaccaccgccttctga
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