Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373698
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Entry
139373698 CDS
T10872
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139373698
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GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
139373698
NCBI-ProteinID:
XP_070970671
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Position
18:complement(52450035..52640772)
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AA seq
822 aa
AA seq
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MKSNQERSNECLPPKKRDFPASTVDERPLVMAPASESQRGENLAWLASVASGHNSGHDRD
SGGGGLDGSRGGQRISTPIESDGPQYKPLCSTITTHTDFLVPSSICSISSSSSSSHQSRV
VTTSLPAMYTSALSQPGGTIQYTQLPPNVQFISSPYTGPYAGYISSQLLSPPPPTSTSQR
SHPDPYPNTTITSQSQISGSSLSVAPQTAPSPHGGTHHLPLHLHSHPHHTLALSGGSQVL
VQYTGPGPERPLTKREEGRPRELHNGDQRGRYERKESKGTPSSSSSSSSQYHQLHQQQNA
QHHYEAYTSHDASGQRTSLMLVPNNRGGPDNHSPDKLRPSAASHTEKGSLLLGKPVSCTP
SSSSTFTFPPPLSVESLKAAVSSLSPHTHTVIQTTHSASEASPLSLGQLSTNTNFYQAGP
GGQPIIGYLAGSAGGQRYHTSLPQHLLIPGAPGSQPIIIPVSGAGVTSLEAGHAAHIATT
TQPQSFPTTLPHTYFTNTTNPNPNPKDEHLFEVPAPYPPLSHPAGVGGTVVQAQLHLPVV
PAPTAPSSAPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERI
DGSHTSNFAIVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSV
GDVCISLTLKNLRNGSLKKTQQTQNQAIEITTSCNMGSIHGPLKSSRSARHGEQENGVGQ
RGSRSGCGRVVVGVGGGVQIASENGELRFGAGGEANSKGGQPGDSESSGGAAKPVSRKRR
WSAPEGRKVERSEKEPPLTLPKPSFITQEVKISIEGRSNIGK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgagtgtctgccccccaagaagagagatttccca
gctagcactgtggacgagaggcccctggtgatggcgcctgctagtgagagccagcgcgga
gagaacctggcatggctggccagtgtagccagcgggcacaacagcgggcacgatagagac
agtggcggaggtggcctcgatggcagtagaggtgggcagcgtatcagcactcccattgag
tctgacgggccacagtacaaaccgctatgctccaccatcaccacacacacagacttcctg
gtcccttcctctatctgttccatctcctcctcctcttcttcatcacatcagtccagagtg
gtgaccacatccctccctgccatgtacacctctgctttgtcccaaccaggggggacgatc
cagtacacccagctgccccccaacgtccagttcatcagttccccttacacagggccctac
gctggctacatctcctcccagctcctctctccccctccacccacctccacatcccaacgc
tcccaccctgacccataccccaacaccaccatcacctcccagtcccagatctctggttcc
tctctgagcgtggccccccagactgctccctcgccacacggtgggacccaccacctgccc
ctccacctgcactcccacccccaccacaccctggccctcagcgggggctcccaggtgctg
gtccagtacacaggccccggccctgagaggcccctaactaagagagaggagggccggccc
agggagttgcacaacggagatcagaggggccgctatgagagaaaggaaagcaaaggaacc
ccctcctcttcttcctcctcttcctctcagtaccaccaactccaccagcagcagaacgcg
cagcatcactatgaggcctacacttcccatgatgcatcagggcaacggacctctctaatg
ctagtgcccaacaaccgcggaggaccagacaaccacagccccgacaaactacggccatcc
gccgcctcgcacacagagaaaggcagcctccttctgggtaaacctgtgtcctgcaccccc
tcctcctcctccacgttcaccttcccccctccgctcagtgtggagagtcttaaggcggcc
gtcagctccctgtcccctcacacccacacagtcatccagaccacacacagcgccagcgag
gcttcacccctctccctgggccaactctcaaccaacaccaacttctaccaggctggcccc
ggcgggcagcccatcatcggctacctggctgggagtgcaggagggcagcggtaccacacc
agtctgccccagcacctgctcatcccaggggccccagggtctcaacctatcatcatcccc
gtcagtggggccggggtcaccagcctggaagctggccatgctgcccacatagccactaca
acccaaccacagtccttccccaccacgctaccccacacttacttcaccaacactaccaac
cctaaccccaaccctaaagatgagcatctatttgaggttccggcgccctacccccctctc
tcccaccctgccggggttggaggcactgtggtccaggcccagctacacctcccggtggtc
ccagctcccacggccccctcctcagccccgtcgctgcctccctacttcatcaagggctct
atcatccagctggcagacggggagctgaagcgcgtggaggacctgaagacggaggacttc
atccagagcgctgagatcagcagcgagctgaagatagactcgtccaccgtggaacgcatc
gatggcagccacacgtccaacttcgccatcgtacagttctccgtgggtgaacaccgcgct
caggtgagtgtggaggtgctggtggagtatcccttcttcgtattcggccagggctggtca
tcgtgctgcccggaccggaccactcagctgttagaactaccctgcaccaagctctcagtg
ggggacgtctgcatctccctcaccctgaagaacctgaggaacggctccctgaagaagacg
cagcagacccagaaccaggctattgagatcactaccagctgcaatatgggctccatccac
ggccccctcaagtcctccaggtcagccaggcacggggagcaggagaacggggtgggccag
agaggctccaggagtggatgtgggagagtggtggttggagtaggtggaggtgttcagatc
gcctcagagaatggggaactgaggttcggcgccgggggagaggccaactcgaaaggaggc
cagcctggagattcagaatctagtggtggtgccgccaagccggtgagccgcaagaggaga
tggtcggcccccgagggccgtaaggtggagaggagcgagaaggagcccccgttgactctg
cccaaaccttcctttatcactcaggaggtaaagatcagcatcgaaggcaggtcaaatata
ggcaagtag
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