Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373704
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Entry
139373704 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139373704
09143 Cell growth and death
04210 Apoptosis
139373704
09144 Cellular community - eukaryotes
04530 Tight junction
139373704
04540 Gap junction
139373704
09142 Cell motility
04814 Motor proteins
139373704
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139373704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139373704
03036 Chromosome and associated proteins [BR:
ocla03036
]
139373704
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139373704
04147 Exosome [BR:
ocla04147
]
139373704
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139373704
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139373704
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139373704
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139373704
Exosomal proteins of other body fluids (saliva and urine)
139373704
Exosomal proteins of colorectal cancer cells
139373704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139373704
NCBI-ProteinID:
XP_070970684
LinkDB
All DBs
Position
18:complement(55064719..55072065)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGTMPNNKAVGSTDDSFTTFFSATGIGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIGNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtgcatgtgggtcaggctggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcacgggatccagccggacggcaccatgcctaacaacaag
gcggtcggtagcactgacgactccttcaccacgttcttcagcgccacgggcatcgggaaa
tacgtgccccgcgccatctttgtagacctggagcccactgtcattgatgaggtgcggaca
ggtacctaccgccagctgtttcaccccgagcagctgatctcagggaaggaggacgcagcc
aataactatgcccgtggccactacactatcggcaaggagatcatcgaccaagtgctggac
aggatccgtaaactggctgaccagtgtacggggctccaaggtttcttggtcttccacagc
ttcggaggaggtaccggttctggtttcacctccctgctcatggagcgtctctcagtcgac
ttcgggaagaagtccaagctggagtttgccatataccctgctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtcgacaatgaggccatctacgacatctgccgcagaaacctggacattgag
cgcccctcttacaccaacctcaacaggctcatcagccagattgtctcctccatcaccgcc
tctctccgcttcgacggtgcccttaacgtggacttgacagagttccagaccaacctggtg
ccttacccccgcatccacttccccctggccacctatgcccctgtcatctcagccgagaag
gcctaccacgagcagctctctgtggctgagatcactaactcctgcttcgagcccgccaac
cagatggtgaagtgcgaccctcgccacggtaagtacatggcgtgctgcctgctgtaccgt
ggagacgtggtgcccaaggatgtcaacgtggccattggcaacatcaagacaaagcgaagc
atccagttcgtggactggtgccctacaggtttcaaagtgggcatcaactaccagccaccc
actgtggtgccagggggtgacctggccaaggtccagagagctgtgtgcatgttgagcaac
accacagccatcgctgaggcctgggcgcgtcttgaccacaagtttgacctgatgtatgcc
aagcgggcattcgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaggactatgaagaggtcggaatcgactcattt
gaggaggacgaggagggagaggagtattag
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